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Marin Delaunay, François Gravey, Olivier Join-Lambert, Yohann Repessé, Sandrine Dahyot, et al.. Phenotypic and genotypic characterization of clinical Staphylococcus lugdunensis isolates: a French retrospective cohort study. Microbiology Spectrum, 2026, ⟨10.1128/spectrum.03856-25⟩. ⟨hal-05673080⟩
Nefert Candace Dossou, Damiano Cerasuolo, Chloé Dubus, Catherine Francois, Alexandre Réguème, et al.. Respiratory syncytial virus (RSV) in older adults: from infection to outcomes – who gets sick, who gets hospitalized, who survives?. BMC Infectious Diseases, 2026, ⟨10.1186/s12879-026-13693-w⟩. ⟨hal-05670759⟩
Margaux Lequitte, Pauline Lenesley, Simon Le Hello, Gilles Loggia. Beyond Protocols: The "Double Burden" and Ethical Dilemmas of Nursing Home Professionals Facing Hurricane Risk. Gerontologist, In press, ⟨10.1093/geront/gnag132⟩. ⟨hal-05662758⟩
Charlotte Charpentier, Thomas Montrouge, Marc Wirden, Véronique Avettand-Fenoel, Camille Tumiotto, et al.. A French national observatory of people with HIV initiating lenacapavir-based treatment after regulatory approval. Antimicrobial Agents and Chemotherapy, 2026, pp.e0022826. ⟨10.1128/aac.00228-26⟩. ⟨hal-05657906⟩
Marie-Pierre Tavolacci, Philippe Berthelot, Jean Dellamonica, Loic Josseran, Benoît Veber, et al.. Financial precarity and mental health among French health students: a nationwide cross-sectional study. BMJ Open, 2026, 16 (6), pp.e104484. ⟨10.1136/bmjopen-2025-104484⟩. ⟨hal-05650861⟩
Mélanie Daligault, François Caron, Albertine Leon, Julien Grosjean. Unified framework for human and veterinary antibiotics: mapping international drug classifications (ATC and ATCvet) to support antimicrobial resistance research. Frontiers in Veterinary Science, 2026, 13, ⟨10.3389/fvets.2026.1796245⟩. ⟨hal-05626374⟩
Lucie Poisson, Quentin Le Hingrat, Fanny Lermechain, Fabienne Tombette, Henri Jullien, et al.. HIV‐1 Non Group‐M Phenotypic Susceptibility to Ibalizumab. Journal of Medical Virology, 2026, 98 (4), ⟨10.1002/jmv.70911⟩. ⟨hal-05589397⟩
Viviane A Agbogan, Florence Bugault, Laure Guenin-Macé, Inta Gribonika, Cyril Planchais, et al.. A skin colonizer disrupts inflammatory and humoral immune defenses in hidradenitis suppurativa. EMBO Molecular Medicine, 2026, 18 (5), pp.1744 - 1770. ⟨10.1038/s44321-026-00407-7⟩. ⟨pasteur-05630538⟩
Kalina Davies, Rosie Drinkwater, Liliana Dávalos, Nicolas Nesi, Mads Bertelsen, et al.. Reduced gene expression and missense mutations in the transporter protein SLC45A2 in a hypopigmented Egyptian rousette fruit bat ( Rousettus aegyptiacus ). Journal of Heredity, 2026, 117 (2), pp.222-234. ⟨10.1093/jhered/esaf070⟩. ⟨hal-05676695⟩
Yann Colardelle, Melanie Daligault, Julien Grosjean, Stefan Darmoni, Badisse Dahamna, et al.. Cancer Cachexia Prevalence Is Underestimated in Medical Records of Patients in a Regional Tertiary Hospital. Journal of Cachexia, Sarcopenia and Muscle, 2026, 17 (1), pp.e70225. ⟨10.1002/jcsm.70225⟩. ⟨hal-05536499⟩
Étienne Audureau, Pierre Bay, Sébastien Préau, Raphael Favory, Aurélie Guigon, et al.. Clinical Phenotypes of Critically Ill Patients with COVID-19 Infected with Omicron: A Nationwide Prospective Cohort Study. Infectious Diseases and Therapy, 2026, 15 (2), pp.605-628. ⟨10.1007/s40121-025-01291-3⟩. ⟨hal-05456469⟩
Camille Cotet, Sebastien Galopin, Anne-Emeline Creach, Marwan Tenouri, Charlotte Le Pont, et al.. Phenotypic and genomic characterization of Roseomonas mucosa , an opportunistic pathogen with discrepancies among antimicrobial susceptibility testing methods. Antimicrobial Agents and Chemotherapy, 2026, ⟨10.1128/aac.01041-25⟩. ⟨hal-05528488⟩
Matthieu Lafaurie, Franck Bruyère, Willy Boutfol, Yvan Caspar, Vincent Cattoir, et al.. Updated guidelines for management of community-acquired urinary tract infections in adult men by the French infectious disease society (SPILF). Infectious Diseases Now, 2026, 56 (6), pp.105312. ⟨10.1016/j.idnow.2026.105312⟩. ⟨hal-05675626⟩
Slim Fourati, Alawiya Reslan, Jérôme Bourret, Jean-Sébastien Casalegno, Yannis Rahou, et al.. Real-world emergence of nirsevimab resistance in breakthrough infections with respiratory syncytial virus-B: a multicentre observational study in France. The Lancet Microbe, 2026, pp.101353. ⟨10.1016/j.lanmic.2026.101353⟩. ⟨hal-05644892⟩
Melanie Bouillon, Damasie Malandain, Sylvie Dargere, Vincent Cattoir, Simon Le Hello, et al.. Revisiting the time to positivity in blood cultures as a prediagnostic tool: an in vitro experiment and retrospective study. Diagnostic Microbiology and Infectious Disease, 2026, 114 (3), pp.117224. ⟨10.1016/j.diagmicrobio.2025.117224⟩. ⟨hal-05454698⟩
Laurie Destruel, Sandrine Dahyot, Laurent Coquet, Magalie Barreau, Stéphanie Legris, et al.. Characterization of Staphylococcus lugdunensis biofilm reveals key differences according to clonal lineage and iron availability. Biofilm, 2025, 10, ⟨10.1016/j.bioflm.2025.100329⟩. ⟨hal-05413363⟩
Blandine Harel, Corinne Sévin, Simon Le Hello, Peggy Moreau, Jean-Christophe Giard, et al.. Genomic epidemiology of strains currently and formerly classified as Enterobacter spp. recovered from equine necropsy samples. PLoS ONE, 2025, 20 (11), pp.e0333701. ⟨10.1371/journal.pone.0333701⟩. ⟨hal-05426336⟩
Romain Legros, Karl Stefic, Sophie Ramel, Charlotte Pronier, Julia Dina, et al.. Molecular diagnosis of respiratory viral infections in cystic fibrosis, sputum versus nasopharyngeal samples. Respiratory Medicine, 2025, 248, pp.108374. ⟨10.1016/j.rmed.2025.108374⟩. ⟨hal-05296437⟩
K Alexandre, Marina Murillo-Torres, Fernando Docobo-Pérez, Álvaro Pascual, Jose Manuel Rodríguez-Martínez. Effect of pH on antimicrobial activity of delafloxacin against Escherichia coli isogenic strains carrying diverse chromosomal and plasmid-mediated fluoroquinolone resistance mechanisms. Microbiology Spectrum, 2025, 13 (12), pp.e0233825. ⟨10.1128/spectrum.02338-25⟩. ⟨hal-05352146⟩
Charles Baulier, Noémie Le Dentu, Mathieu Lozouet, Yves Kam, Gaétan Kerdelhué, et al.. Linezolid use in post-neurosurgical central nervous system infections: A systematic review. Neurosurgical Review, 2025, 48 (1), pp.714. ⟨10.1007/s10143-025-03891-6⟩. ⟨hal-05319080⟩
Manon Fleury, Céline Delestrain, Alice Hadchouel, Julie Mazenq, Myriam Benhamida, et al.. Phenotype‐Genotype Correlations in ABCA3 Patients—The RespiRare Cohort. Pediatric Pulmonology, 2025, 60 (10), pp.e71324. ⟨10.1002/ppul.71324⟩. ⟨inserm-05632562⟩
Charles Baulier, Marion Giry, Manuel Etienne, Julien Kallout, Kévin Alexandre. Pharmacokinetic/pharmacodynamic targets of ß-lactams associated with bacterial killing and suppression of the resistance emergence in the hollow fiber infection model: A systematic review. Journal of Global Antimicrobial Resistance, 2025, 45, pp.220 - 227. ⟨10.1016/j.jgar.2025.10.009⟩. ⟨hal-05352140⟩
Alice Michel, Marie Leoz, Nicolas Nesi, Hortense Petat, Meriadeg Ar Gouilh, et al.. Impact of RNA extraction on respiratory microbiome analysis using third-generation sequencing. BMC Genomics, 2025, 26 (1), pp.908. ⟨10.1186/s12864-025-12028-4⟩. ⟨hal-05310419⟩
Alice Moisan, Fabienne Tombette, Jean-Christophe Plantier. Évolution génétique entre les groupes M et O du VIH-1 : formes recombinantes VIH-1/MO. Virologie, 2025, 29 (5), pp.337-356. ⟨10.1684/vir.2025.1103⟩. ⟨hal-05493913⟩
Mathieu Lorenzo, Maud Pouillon, Jl Thebault, Antonio Lopez, Benjamin Soudais, et al.. Quelles sont les situations de départ prévalentes en médecine générale pour le 2e cycle ? Procédure de sélection pour aboutir à un référentiel. Exercer. La revue francophone de médecine générale, 2025, 36 (216), pp.376-382. ⟨10.56746/EXERCER.2025.216.376⟩. ⟨hal-05473711⟩
Cathia Soulié, Aliou Baldé, Djeneba Fofana, Charlotte Charpentier, Pascale Bonnafous, et al.. No evidence of an effect of the M184I/V on the doravirine/lamivudine/tenofovir switch efficacy in people living with HIV. AIDS. Official journal of the international AIDS Society, 2025, 40 (1), pp.7-15. ⟨10.1097/QAD.0000000000004339⟩. ⟨hal-05267472⟩
Diane Soussan, Marine Salze, Blandine Harel, Victor Combret, Erwan Bourdonnais, et al.. The NagY antiterminator in Enterococcus faecalis: a novel regulatory mechanism and its impact on cell metabolism. Microbiology Spectrum, 2025, 13 (10), ⟨10.1128/spectrum.01137-25⟩. ⟨hal-05322484⟩
Véronica Roman, Frédéric Jourdain, Emilie Pele, Elise Brottet, Anne Guinard, et al.. Tracking Wild-Type Measles Virus in Wastewater Using Multiplex RT-dPCR, A Novel Tool for Measles Surveillance. Water Research, In press, pp.124379. ⟨10.1016/j.watres.2025.124379⟩. ⟨anses-05206297⟩
Hortense Petat, Alice Moisan, Chloé Dubus, Mathilde Chabut, Mélanie Daligault, et al.. Shifting Viral Landscapes: The Impact of Respiratory Syncytial Virus Immunization in Infant Bronchiolitis During 2024–2025 Epidemic Season in France. Journal of Medical Virology, 2025, 97 (8), ⟨10.1002/jmv.70515⟩. ⟨hal-05307897⟩
Hortense Petat, Chervin Hassel, Alice Michel, Camille Charbonnier, Jean-Christophe Plantier, et al.. Microbiosthma: a prospective study following respiratory microbiota in young children with severe preschool wheezing to better understand their respiratory future. BMC Pulmonary Medicine, 2025, 25 (1), pp.342. ⟨10.1186/s12890-025-03812-9⟩. ⟨hal-05310480⟩
Hayley Wilson, Jianbao Dong, Andries van Tonder, Christopher Ruis, Noémie Lefrancq, et al.. Corrigendum: Progressive evolution of Streptococcus equi from Streptococcus equi subsp. zooepidemicus and adaption to equine hosts. Microbial Genomics, 2025, 11 (6), ⟨10.1099/mgen.0.001426⟩. ⟨hal-05162161⟩
Hortense Petat, Matthieu Schuers, François Le Bas, Xavier Humbert, Andry Rabiaza, et al.. Characterizing acute respiratory infections in primary care for better management of viral infections. Npj Primary Care Respiratory Medicine, 2025, 35 (1), pp.28. ⟨10.1038/s41533-025-00434-w⟩. ⟨hal-05196130⟩
Truls E Bjerklund Johansen, Christina Bahrs, Franck Bruyere, Tommaso Cai, Amelia Joseph, et al.. Consensus position statement on advancing the classification of patients and tests of cure in studies of antibiotic treatment of complicated urinary tract infections. The Lancet Infectious Diseases, 2025, ⟨10.1016/S1473-3099(25)00142-2⟩. ⟨hal-05067952⟩
Francois Gravey, Corinne Sévin, Bénédicte Langlois, Karine Maillard, Nathalie Foucher, et al.. Misidentification of Raoultella spp. (R. terrigena, R. planticola) and Klebsiella spp. (K. variicola, K. grimontii) as Klebsiella pneumoniae: Retrospective study of a necropsy-associated bacterial collection from horses. Veterinary Microbiology, 2025, 304, pp.110497. ⟨10.1016/j.vetmic.2025.110497⟩. ⟨hal-05032957⟩
Valérie Pourcher, Olivier Robineau, Jean-Jacques Parienti, Paul Loubet, Christia Palacios, et al.. Factors influencing antiretroviral therapy switching in people with virologically suppressed HIV-1: a cross-sectional multicenter study in France. AIDS. Official journal of the international AIDS Society, 2025, 39 (6), pp.695-700. ⟨10.1097/QAD.0000000000004118⟩. ⟨hal-05646648⟩
Moisan Alice, Fabienne Tombette, Plantier Jean-Christophe. Genetic Evolution Between HIV‐1 Groups M and O: HIV‐1/MO Recombinant Forms. Journal of Medical Virology, 2025, 97 (5), ⟨10.1002/jmv.70358⟩. ⟨hal-05050926⟩
Emmanuel Piednoir, Pascal Thibon, Lea Messidor, Ludivine Launay, Renaud Verdon, et al.. Holistic analysis of the determinants of antibiotic prescription in primary care in France: a cross-sectional study with nationwide panel data. Journal of Antimicrobial Chemotherapy, 2025, 80, pp.1568-1572. ⟨10.1093/jac/dkaf102⟩. ⟨hal-05035361⟩
Lamia Medghoul, Julien Grosjean, Christophe Marguet, Hortense Petat. Clinical course of children with postinfectious bronchiolitis obliterans with versus without comorbid bronchopulmonary dysplasia. Clinical and Experimental Pediatrics, 2025, ⟨10.3345/cep.2025.00122⟩. ⟨hal-05123222⟩
B Billet, L Pellerin, Benjamin Soudais, M Godin, J Perrotte, et al.. Un partenariat entre étudiants en médecine et en théâtre pour appréhender les émotions. Exercer. La revue francophone de médecine générale, 2025, 36 (212), pp.184-190. ⟨10.56746/EXERCER.2025.212.184⟩. ⟨hal-05473718⟩
Julien Brünier, Olivier Meunier, Camille Kolenda, Marie Gueudin, Léa Luciani, et al.. Vers une microbiologie durable : enquête sur l'engagement écoresponsable des microbiologistes français. Revue Francophone des Laboratoires, 2025, 2025 (571), pp.14-22. ⟨10.1016/S1773-035X(25)76344-3⟩. ⟨hal-05039098⟩
Hayley Wilson, Jiangbao Dong, Andries van Tonder, Christopher Ruis, Noémie Lefrancq, et al.. Progressive evolution of Streptococcus equi from Streptococcus equi subsp. zooepidemicus and adaption to equine hosts. Microbial Genomics, 2025, 11 (3), ⟨10.1099/mgen.0.001366⟩. ⟨hal-05032974⟩
Giulia Fantoni, Ala-Eddine Deghmane, François Caron, Muhamed-Kheir Taha. A Bioluminescence-Based Serum Bactericidal Assay to Detect Bactericidal Antibodies Against Neisseria meningitidis in Human Sera. Microorganisms, 2025, 13 (3), pp.595. ⟨10.3390/microorganisms13030595⟩. ⟨hal-05103244⟩
Slim Fourati, Alawiya Reslan, Jérome Bourret, Jean-Sébastien Casalegno, Yannis Rahou, et al.. Genotypic and phenotypic characterisation of respiratory syncytial virus after nirsevimab breakthrough infections: a large, multicentre, observational, real-world study. The Lancet Infectious Diseases, 2025, 25 (3), pp.301-311. ⟨10.1016/S1473-3099(24)00570-X⟩. ⟨hal-05604725⟩
Charlie Zins, Hélène Pailhoriès, Rachel Chenouard, Stéphane Corvec, Sandrine Dahyot, et al.. Antimicrobial activity of new anti-Pseudomonas beta-lactam-beta-lactamase inhibitors against Pseudomonas aeruginosa respiratory isolates recovered during the study for Monitoring Antimicrobial Resistance Trends (SMART) program in France (2016–2022). Infectious Diseases Now, 2025, 55 (4), pp.105056. ⟨10.1016/j.idnow.2025.105056⟩. ⟨inserm-04994196⟩
Johnny Michel, Francesco Monti, Fabien Lamoureux, Djibril Diagouraga, Manuel Etienne, et al.. Unraveling Ceftriaxone Dosing: Free Drug Prediction, Threshold Optimization, and Model Validation. AAPS Journal, 2025, 27 (2), pp.50. ⟨10.1208/s12248-025-01041-w⟩. ⟨hal-05123251⟩
Marisa Haenni, Séverine Murri, Antoine Drapeau, Iarimino Rafidinarivo, Stéphanie Gilles, et al.. Emergence of MRSA ST612 in horses and of MSSA CC398 in cats in France. Journal of Antimicrobial Chemotherapy, 2025, ⟨10.1093/jac/dkaf027⟩. ⟨hal-04974631⟩
Guillaume Geslain, Yasmine Benhadid Brahmi, Valérie Biran, Corinne Levy, Didier Pinquier, et al.. TWENTY-THREE PEDIATRIC CASES OF CITROBACTER KOSERI MENINGITIS IN THE LAST 20 YEARS: STILL A DRAMATIC PROGNOSIS. Pediatric Infectious Disease Journal, 2025, ⟨10.1097/INF.0000000000004735⟩. ⟨inserm-04914863⟩
Elise Pesonel, Cédric Laouénan, Laetitia Guiraud, Josephine Bourner, Isabelle Hoffmann, et al.. Clinical characterisation and outcomes of human clade IIb mpox virus disease - a European multicentre observational cohort study (MOSAIC). Clinical Infectious Diseases, 2025, ⟨10.1093/cid/ciae657⟩. ⟨hal-04870969⟩
Guillemette Unal, Rémonie Seng, Elodie Alessandri-Gradt, Lorraine Plessis, Mathilde Ghislain, et al.. Comparison of the immunological and virological responses to cART between HIV-1/O and HIV-1/M patients followed up in France. Journal of Antimicrobial Chemotherapy, 2025, ⟨10.1093/jac/dkae475⟩. ⟨hal-04954157⟩
Cécile Schimmich, Astrid Vabret, Stéphan Zientara, José Carlos Valle-Casuso. Equine Infectious Anemia Virus Cellular Partners Along the Viral Cycle. Viruses, 2025, 17 (1), pp.5. ⟨10.3390/v17010005⟩. ⟨hal-05364559⟩
Caroline Martin-Duval, Sandrine Dahyot, Inès Coquisart, Benoit Bernay, Martine Pestel-Caron, et al.. Insights on pathoadaptation of sequential Pseudomonas aeruginosa isolates to the urinary tract. Microbiology Spectrum, In press, ⟨10.1128/spectrum.00456-25⟩. ⟨hal-05203855⟩
Adrien Barraud, Romaric Larcher, Gaëtan Gavazzi, Arthur Fourmy, Renaud Verdon, et al.. Pneumocystis pneumonia in older non-HIV-infected patients: a French, multicentre, retrospective, cohort study. Pneumonia, 2025, 17 (1), pp.34. ⟨10.1186/s41479-025-00187-7⟩. ⟨hal-05399910⟩
H. Petat, J. Mazenq. The impact of maternal smoking during pregnancy on respiratory disease in children. Revue des Maladies Respiratoires, 2025, 41 (10), pp.768-775. ⟨10.1016/j.rmr.2024.08.005⟩. ⟨hal-04934789⟩
L Pellerin, P Thillard, Benjamin Soudais, M Theot, E Ferrand-Devouge, et al.. Apport d'une consultation simulée suivie d'une retroaction entre un comédien et un étudiant de 3e cycle en médecine générale. Exercer. La revue francophone de médecine générale, 2025, 36 (209), pp.39-42. ⟨10.56746/EXERCER.2025.209.39⟩. ⟨hal-05473739⟩
Francois Guerin, Mohamed Sassi, François Gravey, Asma Zouari, Benjamin Quenet, et al.. Lactobacillus delbrueckii subsp. allosunkii and lactis as emerging human uropathogens in elderly patients. Journal of Clinical Microbiology, 2025, 63 (5), pp.e0207224. ⟨10.1128/jcm.02072-24⟩. ⟨hal-05106824⟩
Hermann Do Rego, Yousra Kherabi, Stephane Corvec, Chloé Plouzeau-Jayle, Coralie Bouchiat, et al.. Outcomes of Enterococcus faecalis infective endocarditis according to MIC of amoxicillin: a multicentric study. JAC-Antimicrobial Resistance, 2024, 6 (6), ⟨10.1093/jacamr/dlae167⟩. ⟨hal-04764203⟩
Alicia Leymarie, Pascal Thibon, Charlotte Bernigaud, Claire Daurel, Elise Ouedraogo, et al.. Mycobacterium chelonae cutaneous infections unrelated to invasive procedures: A multicentre retrospective case series. Journal of the European Academy of Dermatology and Venereology, 2024, 39 (6), pp.e537-e540. ⟨10.1111/jdv.20521⟩. ⟨hal-04862650⟩
Nicolas Vautrin, Sandrine Dahyot, Marie Leoz, François Caron, Maxime Grand, et al.. Are Escherichia coli causing recurrent cystitis just ordinary uropathogenic E. coli (UPEC) strains?. Virulence, 2024, 16 (1), pp.57. ⟨10.1080/21505594.2024.2444689⟩. ⟨hal-04920727⟩
Alice Moisan, Hadrien Regue, Yannis Rahou, Alexandre Gaymard, Antoine Oblette, et al.. Performance of whole genome sequencing for respiratory syncytial virus: insights from the first external quality assessment, France, 2024. Clinical Microbiology and Infection, 2024, 31 (4), pp.S1198-743X(24)00605-0. ⟨10.1016/j.cmi.2024.12.018⟩. ⟨hal-04870982⟩
Benedicte Langlois, Francois Guerin, Christophe Isnard, Clement Gakuba, Damien Du Cheyron, et al.. Phenotypic and genomic changes in enteric Klebsiella populations during long-term ICU patient hospitalization: the role of RamR regulation. MSphere, 2024, 9 (12), pp.e0070424. ⟨10.1128/msphere.00704-24⟩. ⟨hal-05484299⟩
Tom Cartau, Sylvain Chantepie, Angélique Thuillier-Lecouf, Bénédicte Langlois, Julie Bonhomme. Epidemiology, Clinical, Radiological and Biological Characteristics, and Outcomes of Mucormycosis: A Retrospective Study at a French University Hospital. Journal of Fungi, 2024, 10 (12), pp.884. ⟨10.3390/jof10120884⟩. ⟨hal-04894800⟩
Dominique Ploin, Mathilde Alexandre, Bruno Ventelou, Didier Che, Bruno Coignard, et al.. Prioritisation of infectious diseases from a public health perspective: a multi-criteria decision analysis study, France, 2024. Eurosurveillance, 2024, 29 (50), pp.2400074. ⟨10.2807/1560-7917.ES.2024.29.50.2400074⟩. ⟨hal-04842113⟩
Cécile Schimmich, Astrid Vabret, José-Carlos Valle-Casuso. Efficacy assessment of antiretroviral drugs against equine infectious anemia virus in vitro. Virus Research, 2024, 350, pp.199503. ⟨10.1016/j.virusres.2024.199503⟩. ⟨hal-05364565⟩
Hortense Petat, Christophe Marguet. Three-year outcome of a very young severe uncontrolled preschool wheezers cohort, a real-life study. Respiratory Medicine, 2024, 235, pp.107875. ⟨10.1016/j.rmed.2024.107875⟩. ⟨hal-05224523⟩
Chloé Goncalves, Jérémie Rouger, Isabelle Pellier, Jean-Jacques Parienti, Julien Lejeune, et al.. Impact of socioeconomic factors on time to diagnosis of childhood cancer. Pediatric Hematology-Oncology, 2024, 42 (1), pp.37-53. ⟨10.1080/08880018.2024.2434876⟩. ⟨hal-05050731⟩
Eléna Kokabi, Valérie Bouchart, Stéphane Pronost, Isabelle Lussot-Kervern, Albertine Léon-Seck. Caractérisation in vitro de l’effet antimicrobien des huiles essentielles utilisées comme thérapie alternative en médecine vétérinaire équine. Le Nouveau Praticien Vétérinaire. Equine, 2024, 17-18 (61-62), pp.94-100. ⟨10.1051/npvequi/2024033⟩. ⟨hal-04770165⟩
Tifany Vatignez, Ludovic Lemée, Hélène Morisse-Pradier, Priscille Carvalho-Lallement, Kevin Alexandre, et al.. A 52-year-old immunocompromised man with an unusual cause of infectious lung cavitary inducing acute respiratory failure. Respiratory Medicine and Research, 2024, 86 (10), pp.101101. ⟨10.1016/j.resmer.2024.101101⟩. ⟨hal-05308614⟩
Charles Maurille, François Guérin, Quentin Jehanne, Alexandra Audemard-Verger, Christophe Isnard, et al.. Occurrence of in vivo carbapenem-resistant Campylobacter coli mediated by porA point mutation and overexpression of blaOXA-489 under meropenem treatment. Clinical Microbiology and Infection, 2024, 30 (11), pp.1478 - 1480. ⟨10.1016/j.cmi.2024.06.027⟩. ⟨hal-05484302⟩
Maëlle Riou, Harmony Duclos, Méline Leribillard, Jean-Jacques Parienti, Shailendra Segobin, et al.. Borderline personality disorder and post-traumatic stress disorder in adolescents: protocol for a comparative study of borderline personality disorder with and without comorbid post-traumatic stress disorder (BORDERSTRESS-ADO). BMC Psychiatry, 2024, 24 (1), pp.724. ⟨10.1186/s12888-024-06093-4⟩. ⟨hal-04756804⟩
Matthieu Martineau, Chloé Ambroset, Stéphanie Lefebvre, Eléna Kokabi, Albertine Léon, et al.. Unravelling the main genomic features of Mycoplasma equirhinis. BMC Genomics, 2024, 25 (1), pp.886. ⟨10.1186/s12864-024-10789-y⟩. ⟨hal-04712793⟩
Camille Fletcher, Alice Hadchouel, Caroline Thumerelle, Julie Mazenq, Manon Fleury, et al.. Epidemiology of childhood interstitial lung disease in France: the RespiRare cohort. Thorax, 2024, 79 (9), pp.842-852. ⟨10.1136/thorax-2023-221325⟩. ⟨hal-04965728⟩
Kévin Alexandre, André Gillibert, Sandrine Dahyot, Roland Fabre, Francis Kuhn, et al.. Individual health insurance data of antibiotic delivery in previous months as a tool to predict bacterial resistance of urinary tract infection: A prospective cohort study. Infectious Diseases Now, 2024, 54 (6), pp.104942. ⟨10.1016/j.idnow.2024.104942⟩. ⟨hal-04669488⟩
Laurence Guzylack-Piriou, Blandine Gausseres, Christian Tasca, Chervin Hassel, Guillaume Tabouret, et al.. A loss of function mutation in SOCS2 results in increased inflammatory response of macrophages to TLR ligands and Staphylococcus aureus. Frontiers in Immunology, 2024, 15, pp.1397330. ⟨10.3389/fimmu.2024.1397330⟩. ⟨hal-05105715⟩
Christine Durier, Laetitia Ninove, Sylvie van der Werf, Maeva Lefebvre, Corinne Desaint, et al.. Incidence of COVID-19 mRNA vaccine symptomatic breakthrough infections during Omicron circulation in adults with or without infection prior to vaccination. Infectious Diseases Now, 2024, 54 (5), pp.104886. ⟨10.1016/j.idnow.2024.104886⟩. ⟨hal-04596145⟩
Adeline Baron, Alice Moisan, Guillemette Unal, Véronique Lemée, Manuel Etienne, et al.. Evaluation of the ELITechGroup solution for plasma HIV-1 RNA quantification. Journal of Clinical Virology, 2024, 173, pp.105663. ⟨10.1016/j.jcv.2024.105663⟩. ⟨hal-05038064⟩
François Gravey, Alice Michel, Bénédicte Langlois, Mattéo Gérard, Sébastien Galopin, et al.. Central role of the ramAR locus in the multidrug resistance in ESBL -Enterobacterales. Microbiology Spectrum, 2024, Online ahead of print. ⟨10.1128/spectrum.03548-23⟩. ⟨hal-04628750⟩
Benjamin Soudais, Alexandre Gallais, Matthieu Schuers. ‘Male cystitis does not exist’: A qualitative study of general practitioners’ experiences and management of male urinary tract infections in France. European Journal of General Practice, 2024, 30 (1), ⟨10.1080/13814788.2024.2362693⟩. ⟨hal-04813379⟩
Cathia Soulie, Aliou Balde, Djeneba Fofana, Charlotte Charpentier, Pascale Bonnafous, et al.. DORAVIR: a French national survey of people with HIV-1 treated with an antiretroviral regimen including doravirine. Journal of Antimicrobial Chemotherapy, 2024, 79 (8), pp.1974-1984. ⟨10.1093/jac/dkae194⟩. ⟨hal-04619199⟩
Ségolène Gracias, Ikrame El Yaalaoui, Benoît Visseaux, Charlotte Charpentier, Diane Descamps, et al.. In vitro phenotypic susceptibility of HIV-1 non-group M to CCR5 inhibitor (maraviroc): TROPI-CO study. Microbiology Spectrum, 2024, Online ahead of print. ⟨10.1128/spectrum.03895-23⟩. ⟨hal-04615634⟩
Hortense Petat, Sandrine Corbet, Bryce Leterrier, Astrid Vabret, Meriadeg Ar Gouilh. Unravelling the acute respiratory infection landscape: virus type, viral load, health status and coinfection do matter. Frontiers in Cellular and Infection Microbiology, 2024, 14, ⟨10.3389/fcimb.2024.1380855⟩. ⟨hal-05224500⟩
Manon Vautrin, Fabienne Tombette, Vinca Icard, Marie Leoz, Mary-Anne Trabaud, et al.. First evidence of a mother-to-child transmission of an HIV-1/MO intergroup recombinant form. Clinical Microbiology and Infection, 2024, 30 (5), pp.691-693. ⟨10.1016/j.cmi.2024.02.013⟩. ⟨hal-05037951⟩
Guy Gorochov, Jacques Ropers, Odile Launay, Karim Dorgham, Omaira da Mata-Jardin, et al.. Serum and Salivary IgG and IgA Response After COVID-19 Messenger RNA Vaccination. JAMA Network Open, 2024, 7, ⟨10.1001/jamanetworkopen.2024.8051⟩. ⟨hal-04871351v2⟩
Simplice Dzamitika, Françoise Le Boulaire, Catherine Coignard, Claire Vincent, Jean-Christophe Plantier, et al.. Performance Evaluation of the Access anti-HBc Total Assay on the DxI 9000 Access Immunoassay Analyzer. Diagnostic Microbiology and Infectious Disease, 2024, 110 (1), pp.116303. ⟨10.1016/j.diagmicrobio.2024.116303⟩. ⟨hal-04560988⟩
A. Rincé, Albertine Léon, Sandrine Petry, Peggy Moreau. La rhodococcose, une maladie complexe : comment y remédier?. L'actu des labos normands en santé équine, 2024, 1, pp.12-13. ⟨hal-04780941⟩
Marguerite Lockhart-Bouron, Noémie Vanel, Michael Levy, Anaïs R. Briant, Etienne Javouhey, et al.. Severe acute respiratory syndrome coronavirus-2-related and imputable deaths in children: results from the French pediatric national registry.. World Journal of Pediatrics, 2024, World Journal of Pediatrics, ⟨10.1007/s12519-023-00791-x⟩. ⟨hal-04602209⟩
Sung-Min Cho, Lavienraj Premraj, Denise Battaglini, Jonathon Paul Fanning, Jacky Suen, et al.. Sex differences in post-acute neurological sequelae of SARS-CoV-2 and symptom resolution in adults after coronavirus disease 2019 hospitalization: an international multi-centre prospective observational study. Brain Communications, 2024, 6 (2), pp.44. ⟨10.1093/braincomms/fcae036⟩. ⟨hal-04831170⟩
Pierre Becquart, Linda Bohou Kombila, Telstar Ndong Mebaley, Christophe Paupy, Déborah Garcia, et al.. Evidence for circulation of Rift Valley fever virus in wildlife and domestic animals in a forest environment in Gabon, Central Africa. PLoS Neglected Tropical Diseases, 2024, 18 (3), pp.e0011756. ⟨10.1371/journal.pntd.0011756⟩. ⟨pasteur-04670578⟩
Benoit Visseaux, Jérémie Gautier, Françoise Le Boulaire, Catherine Coignard, Claire Vincent, et al.. Performance evaluation of the Access HBsAg and Access HBsAg confirmatory assays on the DxI 9000 Access immunoassay analyzer. Practical Laboratory Medicine, 2024, 39, pp.e00390. ⟨10.1016/j.plabm.2024.e00390⟩. ⟨hal-04510055⟩
Alice Moisan, Fabienne Tombette, Manon Vautrin, Elodie Alessandri-Gradt, Thomas Mourez, et al.. In vitro replicative potential of an HIV-1/MO intergroup recombinant virus compared to HIV-1/M and HIV-1/O parental viruses. Scientific Reports, 2024, 14 (1), pp.1730. ⟨10.1038/s41598-024-51873-3⟩. ⟨hal-05037956⟩
François Gravey, Corinne Sevin, Sophie Castagnet, Nathalie Foucher, Karine Maillard, et al.. Antimicrobial resistance and genetic diversity of Klebsiella pneumoniae strains from different clinical sources in horses. Frontiers in Microbiology, 2024, Infectious Agents and Disease, 14, pp.1334555. ⟨10.3389/fmicb.2023.1334555⟩. ⟨hal-04393836⟩
Emmanuel Piednoir, Pascal Thibon, Elise Fiaux, S Cabon, Renaud Verdon, et al.. Late delivery of antibiotics: a new proxy for antimicrobial stewardship?. Clinical Microbiology and Infection, 2024, Clinical Microbiology and Infection : the Official Publication of the European, 30 (6), pp.828.e1-828.e3. ⟨10.1016/j.cmi.2023.12.029⟩. ⟨hal-04483577⟩
Charlotte Le Pont, Benoît Bernay, Mattéo Gérard, Anne Dhalluin, François Gravey, et al.. Proteomic characterization of persisters in Enterococcus faecium. BMC Microbiology, 2024, 24 (1), pp.9. ⟨10.1186/s12866-023-03162-8⟩. ⟨hal-05224541⟩
Slim Fourati, Alawiya Reslan, Jérome Bourret, Jean-Sébastien Casalegno, Yannis Rahou, et al.. Genotypic and phenotypic characterisation of respiratory syncytial virus after nirsevimab breakthrough infections: a large, multicentre, observational, real-world study. The Lancet Infectious Diseases, 2024, 25 (3), pp.301-311. ⟨10.1016/S1473-3099(24)00570-X⟩. ⟨hal-04743079⟩
Pierre Bay, Étienne Audureau, Sébastien Préau, Raphael Favory, Aurélie Guigon, et al.. COVID-19 associated pulmonary aspergillosis in critically-ill patients: a prospective multicenter study in the era of Delta and Omicron variants. Annals of Intensive Care, 2024, 14 (1), pp.65. ⟨10.1186/s13613-024-01296-0⟩. ⟨hal-04577615v2⟩
Emmanuel Piednoir, Pascal Thibon, Marianne Delestre, Elise Fiaux, Francois Lebas, et al.. Excessive prescription duration is a major contributor of inappropriate antibiotic use in primary care. Infectious Diseases Now, 2024, 54 (7), pp.104962. ⟨10.1016/j.idnow.2024.104962⟩. ⟨hal-04700400⟩
Nicolas de Prost, Etienne Audureau, Antoine Guillon, Lynda Handala, Sébastien Préau, et al.. Clinical phenotypes and outcomes associated with SARS-CoV-2 Omicron sublineage JN.1 in critically ill COVID-19 patients: a prospective, multicenter cohort study in France, November 2022 to January 2024. Annals of Intensive Care, 2024, 14 (1), pp.101. ⟨10.1186/s13613-024-01319-w⟩. ⟨inserm-04635770⟩
Charles Maurille, Aurélie Baldolli, Christian Creveuil, Jean-Jacques Parienti, Jocelyn Michon, et al.. Pharmacokinetics and safety of daptomycin administered subcutaneously in healthy volunteers: a single-blinded randomized crossover trial. Journal of Antimicrobial Chemotherapy, 2024, 79 (11), pp.3016-3022. ⟨10.1093/jac/dkae324⟩. ⟨hal-04714758⟩
Thien Phong Vu Manh, Carla Gouin, Julien de Wolf, Luc Jouneau, Florentina Pascale, et al.. SARS-CoV2 infection in whole lung primarily targets macrophages that display subset-specific responses. Cellular and Molecular Life Sciences, 2024, 81 (1), pp.351. ⟨10.1007/s00018-024-05322-z⟩. ⟨hal-04687367⟩
Pol Prévot-Monsacré, Florent Hamaide-Defrocourt, Ophélie Guyonvarch, Shirley Masse, Cécile Souty, et al.. What is the relevancy of a surveillance of mumps without a systematic laboratory confirmation in highly immunized populations? Epidemiology of suspected and biologically confirmed mumps cases seen in general practice in France between 2014 and 2020. Vaccine, 2024, 42 (5), pp.1065-1070. ⟨10.1016/j.vaccine.2023.12.017⟩. ⟨hal-04616694⟩
Delphine Vergoz, Hung Le, Benoit Bernay, Annick Schaumann, Magalie Barreau, et al.. Antibiofilm and Antivirulence Properties of 6-Polyaminosteroid Derivatives against Antibiotic-Resistant Bacteria. Antibiotics, 2023, 13, ⟨10.3390/antibiotics13010008⟩. ⟨hal-04736526⟩
J. Dina, Alice Moisan, P. Thibon, C. Creveuil, J. Adnet, et al.. Characteristics of respiratory viruses’ circulation through a six-year period (2016–2022) in a pediatric population in Normandy, France, and the impact of COVID-19 pandemic. Microbiology Spectrum, 2023, 11 (6), ⟨10.1128/spectrum.01867-23⟩. ⟨hal-05037964⟩
Marine Pottier, François Gravey, Sophie Castagnet, Michel Auzou, Bénédicte Langlois, et al.. A 10-year microbiological study of Pseudomonas aeruginosa strains revealed the circulation of populations resistant to both carbapenems and quaternary ammonium compounds. Scientific Reports, 2023, 13 (1), pp.2639. ⟨10.1038/s41598-023-29590-0⟩. ⟨hal-04034542⟩
Matthieu Martineau, Eléna Kokabi, Anis Taiebi, Stéphanie Lefebvre, Sophie Pradier, et al.. Epidemiology and pathogenicity of M. equirhinis in equine respiratory disorders. Veterinary Microbiology, 2023, 287, pp.109926. ⟨10.1016/j.vetmic.2023.109926⟩. ⟨hal-04314716⟩
Sarah Benezech, Liliane Khoryati, Jade Cognard, Stejara Netea, Taushif Khan, et al.. Pre–Covid-19, SARS-CoV-2–Negative Multisystem Inflammatory Syndrome in Children. New England Journal of Medicine, 2023, 389 (22), pp.2105-2107. ⟨10.1056/NEJMc2307574⟩. ⟨hal-04879876⟩
Hortense Petat, Matthieu Schuers, Christophe Marguet, Xavier Humbert, François Le Bas, et al.. Positive and negative viral associations in patients with acute respiratory tract infections in primary care: the ECOVIR study. Frontiers in Public Health, 2023, 11, ⟨10.3389/fpubh.2023.1269805⟩. ⟨hal-05224438⟩
Laurie Destruel, Marine Lecomte, Maxime Grand, Marie Leoz, Martine Pestel-Caron, et al.. Impact of clonal lineages on susceptibility of Staphylococcus lugdunensis to chlorhexidine digluconate and chloride benzalkonium. BMC Microbiology, 2023, 23 (1), pp.337. ⟨10.1186/s12866-023-03088-1⟩. ⟨hal-05224509⟩
Coralie Lupo, Clément Pillon, Jean-François Bruyas, Christel Marcillaud-Pitel, Albertine Léon-Seck. Bilan de la surveillance des avortements équins par le Réseau d’épidémiosurveillance en pathologie équine (RESPE). Le Nouveau Praticien Vétérinaire. Equine, 2023, 17 (58), pp.12-18. ⟨10.1051/npvequi/2023032⟩. ⟨hal-04295412⟩
Albertine Léon, Clément Pillon, Coralie Lupo, Jean-François Bruyas. Les causes infectieuses connues et soupçonnées des avortements de la jument. Le Nouveau Praticien Vétérinaire. Equine, 2023, 17 (58), pp.6-11. ⟨10.1051/npvequi/2023024⟩. ⟨hal-04295409⟩
Elodie Alessandri-Gradt, Camille Charbonnier, Jean-Christophe Plantier, Hélène Marini, Damien Costa, et al.. Knowledge, attitudes and practices of French university students towards COVID-19 prevention—are health students better?. PLoS ONE, 2023, 18 (11), pp.e0287716. ⟨10.1371/journal.pone.0287716⟩. ⟨hal-04275531⟩
Marine Stoldick, Margot Vannier, Mikael Verdalle-Cazes, Manuel Etienne, Kévin Alexandre. Short-Course Versus Prolonged-Course Antimicrobial Therapy in Adults With Catheter-Related Septic Thrombosis: A Propensity-Weighted Retrospective Study. Open Forum Infectious Diseases, 2023, 10 (11), ⟨10.1093/ofid/ofad530⟩. ⟨hal-04853526⟩
Emmanuel Forestier, Lea Janosch, Virginie Vitrat, Renaud Verdon, Xavier Humbert, et al.. Subcutaneous antibiotic therapy use by French general practitioners: Its interest and limitations. Infectious Diseases Now, 2023, 53 (7), pp.104768. ⟨10.1016/j.idnow.2023.104768⟩. ⟨hal-05004049⟩
Maya L. Nadimpalli, Marc Stegger, Roberto A. Viau, Vuthy Yith, Agathe de Lauzanne, et al.. Plugging the leaks: antibiotic resistance at human–animal interfaces in low-resource settings. Frontiers in Ecology and the Environment, 2023, 21 (9), pp.428-434. ⟨10.1002/fee.2639⟩. ⟨hal-04231466⟩
Marine Wasniewski, Franck Boué, Céline Richomme, Etienne Simon-Lorière, Sylvie Van Der Werf, et al.. Investigations into SARS-CoV-2 and other coronaviruses on mink farms in France late in the first year of the COVID-19 pandemic. PLoS ONE, 2023, 18 (8), pp.e0290444. ⟨10.1371/journal.pone.0290444⟩. ⟨anses-04261882⟩
Nicolas Vautrin, Kévin Alexandre, Martine Pestel-Caron, Estelle Bernard, Roland Fabre, et al.. Contribution of Antibiotic Susceptibility Testing and CH Typing Compared to Next-Generation Sequencing for the Diagnosis of Recurrent Urinary Tract Infections Due to Genetically Identical Escherichia coli Isolates: a Prospective Cohort Study of Cystitis in Women. Microbiology Spectrum, 2023, 11 (4), ⟨10.1128/spectrum.02785-22⟩. ⟨hal-05224420⟩
Marta Lourenço, Lisa Osbelt, Virginie Passet, François Gravey, Daniela Megrian, et al.. Phages against Noncapsulated Klebsiella pneumoniae: Broader Host range, Slower Resistance. Microbiology Spectrum, 2023, 17 (4), pp.e0481222. ⟨10.1128/spectrum.04812-22⟩. ⟨pasteur-04149322⟩
Albertine Léon, Clément Pillon, Inès Tebourski, Jean‐françois Bruyas, Coralie Lupo. Overview of the causes of abortion in horses, their follow‐up, and management.. Reproduction in Domestic Animals, 2023, ⟨10.1111/rda.14406⟩. ⟨hal-04149173⟩
Didier Pinquier, Pascal Crepey, Pierre Tissières, Astrid Vabret, Jean‐christophe Rozé, et al.. Correction to: Preventing Respiratory Syncytial Virus in Children in France: A Narrative Review of the Importance of a Reinforced Partnership Between Parents, Healthcare Professionals, and Public Health Authorities. Infectious Diseases and Therapy, 2023, 12 (6), pp.1739-1740. ⟨10.1007/s40121-023-00807-z⟩. ⟨hal-04239265⟩
Carine Lehoussel, François Gravey, Camille Jeanne-Leroyer, Simon Le Hello. Épidémie de Klebsiella pneumoniae productrice de bêtalactamases à spectre étendu en réanimation chirurgicale mise en évidence par le séquençage. Hygiènes, 2023. ⟨hal-04185257⟩
Delphine Vergoz, Flore Nilly, Florie Desriac, Magalie Barreau, Antoine Géry, et al.. 6-Polyaminosteroid Squalamine Analogues Display Antibacterial Activity against Resistant Pathogens. International Journal of Molecular Sciences, 2023, 24 (10), pp.8568. ⟨10.3390/ijms24108568⟩. ⟨hal-04161494⟩
Alice Moisan, Anaïs Soares, Fabienne de Oliveira, Elodie Alessandri-Gradt, François Lecoquierre, et al.. Evaluation of Analytical and Clinical Performance and Usefulness in a Real-Life Hospital Setting of Two in-House Real-Time RT-PCR Assays to Track SARS-CoV-2 Variants of Concern. Viruses, 2023, 15 (5), pp.1115. ⟨10.3390/v15051115⟩. ⟨hal-05038193⟩
François Gravey, S. Wilson, A. Denisenko, C. Lehoussel, Marguerite Fines-Guyon, et al.. Highlighting extended-spectrum beta-lactamase-producing Klebsiella pneumoniae outbreak by routine genomic typing. Heliyon, 2023, 9 (5), pp.e16131. ⟨10.1016/j.heliyon.2023.e16131⟩. ⟨hal-04185268⟩
Léadisaelle Hosanna Lenguiya, Matthieu Fritz, Daphné de Riols de Fonclare, Sandrine Corbet, Pierre Becquart, et al.. Whole-Genome Characterization of SARS-CoV-2 Reveals Simultaneous Circulation of Three Variants and a Putative Recombination (20B/20H) in Pets, Brazzaville, Republic of the Congo. Viruses, 2023, 15 (4), pp.933. ⟨10.3390/v15040933⟩. ⟨hal-04120276⟩
Anaïs Appegren, Maria Laura Boschiroli, Krystel de Cruz, Lorraine Michelet, Geneviève Héry-Arnaud, et al.. Genetic Diversity and Population Structure of Mycobacterium bovis at the Human-Animal-Ecosystem Interface in France: “A One Health Approach”. Pathogens, 2023, 12 (4), pp.548. ⟨10.3390/pathogens12040548⟩. ⟨anses-04265771⟩
Boris K Tchounga, Mélanie Bertine, Florence Damond, Valentine Marie Ferré, André Inwoley, et al.. Molecular confirmation of HIV-1 and HIV-2 coinfections among initially serologically dually-reactive samples from patients living in West Africa.. PLoS ONE, 2023, 18 (3), pp.e0283602. ⟨10.1371/journal.pone.0283602⟩. ⟨hal-04228561⟩
Elodie Alessandri-Gradt, Alice Moisan, Jean-Christophe Plantier. HIV-1 Non-Group M Strains and ART. Viruses, 2023, 15 (3), pp.780. ⟨10.3390/v15030780⟩. ⟨hal-05037971⟩
Margo Fevre, Camille Jeanne-Leroyer, Paul Dequire, François Gravey, Simon Le Hello. Séquençage du génome entier des entérobactéries productrices de bêtalactamases à spectre élargi au sein d’un établissement de santé. Hygiènes, 2023. ⟨hal-04185242⟩
Jeanne Iachkine, Niccolò Buetti, Harm-Jan de Grooth, Anaïs Briant, Olivier Mimoz, et al.. Development and validation of a multivariable model predicting the required catheter dwell time among mechanically ventilated critically ill patients in three randomized trials. Annals of Intensive Care, 2023, 13 (1), pp.5. ⟨10.1186/s13613-023-01099-9⟩. ⟨hal-04087800⟩
Agathe Lepissier, Anne Sophie Bonnel, Nathalie Wizla, Laurence Weiss, Marie Mittaine, et al.. Moving the Dial on Airway Inflammation in Response to Trikafta® in Adolescents with Cystic Fibrosis. American Journal of Respiratory and Critical Care Medicine, 2023, Online ahead of print. ⟨10.1164/rccm.202210-1938LE⟩. ⟨inserm-03944455⟩
Sophie Geyl, Benjamin Redelsperger, Clara Yzet, Bertrand Napoleon, Romain Legros, et al.. Risk factors for stent dysfunction during long-term follow-up after EUS-guided biliary drainage using lumen-apposing metal stents: A prospective study. Endoscopic Ultrasound, 2023, ⟨10.4103/EUS-D-22-00120⟩. ⟨hal-04032468⟩
Hajar El Filaly, Christophe Desterke, Ahmed Outlioua, Wafaa Badre, Moncef Rabhi, et al.. CXCL-8 as a signature of severe Helicobacter pylori infection and a stimulator of stomach region-dependent immune response. Clinical Immunology, 2023, 252, pp.109648. ⟨10.1016/j.clim.2023.109648⟩. ⟨hal-04304681⟩
Vincent Guiraud, Jonathan Bocobza, Marion Desmonet, Florence Damond, Jean-Christophe Plantier, et al.. Are confirmatory assays reliable for HIV-1 / HIV-2 infection differentiation? A multicenter study. Journal of Clinical Microbiology, In press, ⟨10.1128/jcm.00619-23⟩. ⟨hal-04164703⟩
Laurent Hocqueloux, Sandrine Lefeuvre, Julie Bois, Sylvie Brucato, Antoine Alix, et al.. Bioavailability of dissolved and crushed single tablets of bictegravir, emtricitabine, tenofovir alafenamide in healthy adults: the SOLUBIC randomized crossover study. Journal of Antimicrobial Chemotherapy, 2023, 78 (1), pp.161-168. ⟨10.1093/jac/dkac369⟩. ⟨hal-03906673⟩
François Guérin, François Gravey, Sophie Reissier, Malo Penven, Charlotte Michaux, et al.. Temocillin Resistance in the Enterobacter cloacae Complex Is Conferred by a Single Point Mutation in BaeS, Leading to Overexpression of the AcrD Efflux Pump. Antimicrobial Agents and Chemotherapy, 2023, 67 (6), pp.e00358-23. ⟨10.1128/aac.00358-23⟩. ⟨hal-04117033⟩
Agnès Jousset, Sandrine Bernabeu, Cécile Emeraud, Rémy Bonnin, Alexandra Lomont, et al.. Evaluation of ceftolozane-tazobactam susceptibility on a French nationwide collection of Enterobacterales. Journal of Global Antimicrobial Resistance, 2023, 32, pp.78-84. ⟨10.1016/j.jgar.2023.01.003⟩. ⟨inserm-03962400⟩
Zein Assad, Zaba Valtuille, Alexis Rybak, Florentia Kaguelidou, Andrea Lazzati, et al.. Unique Changes in the Incidence of Acute Chest Syndrome in Children with Sickle-Cell Disease Unravel the Role of Respiratory Pathogens: A Time-Series Analysis. Chest, In press, 165 (1), pp.150-160. ⟨10.1016/j.chest.2023.07.4219⟩. ⟨hal-04185307⟩
Marine Pottier, Sophie Castagnet, François Gravey, Guillaume Leduc, Corinne Sévin, et al.. Antimicrobial Resistance and Genetic Diversity of Pseudomonas aeruginosa Strains Isolated from Equine and Other Veterinary Samples. Pathogens, 2022, 12 (1), pp.64. ⟨10.3390/pathogens12010064⟩. ⟨hal-03975569⟩
Tristan de Nattes, Sophie Candon, Véronique Lemée, Charlotte Laurent, Dominique Guerrot, et al.. Humoral response to a fourth dose of mRNA vaccine in kidney transplant recipient responders to three doses of mRNA vaccine. Clinical Kidney Journal, 2022, 15 (12), pp.2343-2345. ⟨10.1093/ckj/sfac183⟩. ⟨hal-05150075⟩
Matthieu Martineau, Sophie Castagnet, Eléna Kokabi, Agnès Tricot, Maryne Jaÿ, et al.. Detection of Mycoplasma spp. in horses with respiratory disorders. Equine Veterinary Journal, 2022, ⟨10.1111/evj.13918⟩. ⟨hal-03934934⟩
Carlo Felix Maria Jung, Rachel Hallit, Annegret Müller-Dornieden, Mélanie Calmels, Diane Goere, et al.. Reply to Danese et al.. Endoscopy, 2022, 55 (01), pp.101-101. ⟨10.1055/a-1901-8750⟩. ⟨hal-04601550⟩
Didier Pinquier, Pascal Crepey, Pierre Tissières, Astrid Vabret, Jean-Christophe Roze, et al.. Preventing Respiratory Syncytial Virus in Children in France: A Narrative Review of the Importance of a Reinforced Partnership Between Parents, Healthcare Professionals, and Public Health Authorities. Infectious Diseases and Therapy, 2022, 12, pp.317-332. ⟨10.1007/s40121-022-00737-2⟩. ⟨hal-03922997v2⟩
Hortense Petat, Matthieu Schuers, Sandrine Corbet, Xavier Humbert, François Le Bas, et al.. The Design and Implementation of the ECOVIR Project: A Primary Health Care Surveillance System to Strengthen Co-Detection of Respiratory Viruses in Normandy. Methods and Protocols, 2022, 5 (6), pp.98. ⟨10.3390/mps5060098⟩. ⟨hal-03993878⟩
Christine Durier, Laetitia Ninove, Maeva Lefebvre, Anne Radenne, Corinne Desaint, et al.. Neutralizing antibodies against SARS-CoV-2 variants following mRNA booster vaccination in adults older than 65 years. Scientific Reports, 2022, 12 (1), pp.20373. ⟨10.1038/s41598-022-24409-w⟩. ⟨hal-04119081⟩
Jérémie Albouys, Sophie Geyl, Thomas Lambin, Romain Legros, Aurélie Charissoux, et al.. Diagnosis of an unexpected colonic submucosal lesion by double-clip traction endoscopic submucosal dissection. Endoscopy, 2022, 55 (S 01), pp.E240-E241. ⟨10.1055/a-1941-8301⟩. ⟨hal-04601825⟩
Lucile Pantel, François Guérin, Marine Serri, François Gravey, Jessica Houard, et al.. Exploring Cluster-Dependent Antibacterial Activities and Resistance Pathways of NOSO-502 and Colistin against Enterobacter cloacae Complex Species. Antimicrobial Agents and Chemotherapy, 2022, 66 (11), pp.e0077622. ⟨10.1128/aac.00776-22⟩. ⟨hal-03828598⟩
Mathieu Pioche, Louis-Jean Masgnaux, Jérôme Rivory, Thierry Ponchon, Timothée Wallenhorst, et al.. Endoscopic submucosal dissection in the colon with adaptive traction device: resection strategy and device setup. Endoscopy, 2022, 55 (S 01), pp.E171-E172. ⟨10.1055/a-1959-2010⟩. ⟨hal-04592175⟩
Nefert Candace Dossou, Isidore Gaubert, Elodie Maille, Remy Morello, Renaud Cassier, et al.. Use of LoopDeelab during the COVID-19 Pandemic: An Innovative Device for Field Diagnosis. Viruses, 2022, 14 (9), pp.2062. ⟨10.3390/v14092062⟩. ⟨hal-05604715⟩
Amélie Labonde, Guillaume Lades, Antoine Debourdeau, Olivier Ragi, Lauriane Lehmann, et al.. Gastric peroral endoscopic myotomy in refractory gastroparesis: long-term outcomes and predictive score to improve patient selection. Gastrointestinal Endoscopy, 2022, 96 (3), pp.500-508.e2. ⟨10.1016/j.gie.2022.04.002⟩. ⟨hal-04504167⟩
Jean Grimaldi, Louis-Jean Masgnaux, Jérôme Rivory, Romain Legros, Timothée Wallenhorst, et al.. Multipolar traction with adjustable force increases procedure speed during endoscopic submucosal dissection: the A-TRACT-4 traction device. Endoscopy, 2022, 54 (S 02), pp.E1013-E1014. ⟨10.1055/a-1904-7666⟩. ⟨hal-04592173⟩
Louis-Jean Masgnaux, Jean Grimaldi, Romain Legros, Jérôme Rivory, Timothée Wallenhorst, et al.. Endoscopic submucosal dissection in the colon using a novel adjustable traction device: A-TRACT-2. Endoscopy, 2022, 54 (S 02), pp.E988-E989. ⟨10.1055/a-1888-3963⟩. ⟨hal-04592169⟩
Dominique Bertrand, Charlotte Laurent, Veronique Lemée, Ludivine Lebourg, Mélanie Hanoy, et al.. Efficacy of anti–SARS-CoV-2 monoclonal antibody prophylaxis and vaccination on the Omicron variant of COVID-19 in kidney transplant recipients. Kidney International, 2022, 102 (2), pp.440-442. ⟨10.1016/j.kint.2022.05.007⟩. ⟨hal-05150060⟩
Jérémie Albouys, Sophie Geyl, Lambin Thomas, Thibault Kaighobadi, Romain Legros, et al.. Double-clip traction endoscopic submucosal dissection: an interesting alternative method for the resection of pedunculated polyps. Endoscopy, 2022, 54 (S 02), pp.E929-E930. ⟨10.1055/a-1841-5513⟩. ⟨hal-04502607⟩
Borathchakra Oung, Jérémie Albouys, Sophie Geyl, Romain Legros, Thomas Lambin, et al.. “Spider-traction” endoscopic submucosal dissection for a submucosal lesion invading the site of a previous appendectomy. Endoscopy, 2022, 54 (S 02), pp.E897-E898. ⟨10.1055/a-1847-7438⟩. ⟨hal-04592184⟩
Sophie Geyl, Marion Schaefer, Mathieu Pioche, Martin Dahan, Romain Legros, et al.. Cold-snare endoscopic mucosal resection of large duodenal laterally spreading tumors: is cold the future gold standard?. Endoscopy, 2022, 54 (S 02), pp.E894-E895. ⟨10.1055/a-1841-5607⟩. ⟨hal-04502626⟩
Marie Siatkowski, Sandrine Dahyot, Martine Pestel-Caron, Sophie Boyer. Performance evaluation of UF-4000 body fluid mode for automated body fluid cell counting. Clinica Chimica Acta, 2022, 531, pp.152-156. ⟨10.1016/j.cca.2022.04.002⟩. ⟨hal-03706354⟩
Stéphane Scheer, Timothée Wallenhorst, Jérémie Albouys, Raphael Olivier, Martin Dahan, et al.. Endoscopic submucosal dissection or piecemeal endoscopic mucosal resection for large superficial colorectal lesions: A cost effectiveness study. Clinics and Research in Hepatology and Gastroenterology, 2022, 46 (6), pp.101969. ⟨10.1016/j.clinre.2022.101969⟩. ⟨hal-04592190⟩
Adrien Patenotte, Clara Yzet, Timothée Wallenhorst, Fabien Subtil, Sarah Leblanc, et al.. Diagnostic endoscopic submucosal dissection for colorectal lesions with suspected deep invasion. Endoscopy, 2022, 55 (02), pp.192-197. ⟨10.1055/a-1866-8080⟩. ⟨hal-04500038⟩
Charles Maurille, Julie Bonhomme, Anaïs Briant, Jean-Jacques Parienti, Renaud Verdon, et al.. Association between Following the ESCMID Guidelines for the Management of Candidemia and Mortality: A Retrospective Cohort Study. Journal of Fungi, 2022, 8 (5), pp.541. ⟨10.3390/jof8050541⟩. ⟨hal-04420467⟩
Marion Giry, Sacha Sarfati, Martine Pestel-Caron, Julien Wils, Fabien Lamoureux, et al.. Comment on: Pharmacodynamic evaluation of intermittent versus extended and continuous infusions of piperacillin/tazobactam in a hollow-fibre infection model against Klebsiella pneumoniae. Journal of Antimicrobial Chemotherapy, 2022, ⟨10.1093/jac/dkac150⟩. ⟨hal-03670777⟩
Alice Moisan, Brice Mastrovito, Fabienne de Oliveira, Mélanie Martel, Hugues Hedin, et al.. Evidence of transmission and circulation of Deltacron XD recombinant SARS-CoV-2 in Northwest France. Clinical Infectious Diseases, 2022, ⟨10.1093/cid/ciac360⟩. ⟨hal-03706342⟩
Dominique Bertrand, Veronique Lemée, Charlotte Laurent, Mathilde Lemoine, Mélanie Hanoy, et al.. Waning antibody response and cellular immunity 6 months after third dose SARS-Cov-2 mRNA BNT162b2 vaccine in kidney transplant recipients. American Journal of Transplantation, 2022, 22 (5), pp.1498-1500. ⟨10.1111/ajt.16954⟩. ⟨hal-05150027⟩
Charlène Martin, Guillemette Unal, Jean-Christophe Plantier, Elodie Alessandri-Gradt. Bictegravir-based antiretroviral therapy in HIV-1 group O patients: data from real-life bictegravir/emtricitabine/tenofovir alafenamide switches. Journal of Antimicrobial Chemotherapy, 2022, ⟨10.1093/jac/dkac143⟩. ⟨hal-03706317⟩
Harriet Corvol, Sandra de Miranda, Clémence Dehillotte, Lydie Lemonnier, Raphael Chiron, et al.. Cumulative Incidence and Risk Factors for Severe Coronavirus Disease 2019 in French People With Cystic Fibrosis. Clinical Infectious Diseases, 2022, 75 (12), pp.2135-2144. ⟨10.1093/cid/ciac333⟩. ⟨hal-03827698⟩
Armand Grelier, Olivia Guerin, Fathia Levavasseur, Frédérique Caillot, Jacques Benichou, et al.. Personal and professional quality of life among French health care workers during the first COVID-19 wave: a cross-sectional study. BMC Nursing, 2022, 21 (1), pp.80. ⟨10.1186/s12912-022-00860-y⟩. ⟨inserm-03689848⟩
Jean-Jacques Parienti, Harm-Jan de Grooth. Clinical relevance of nasopharyngeal SARS-CoV-2 viral load reduction in outpatients with COVID-19. Journal of Antimicrobial Chemotherapy, 2022, 77 (7), pp.2038-2039. ⟨10.1093/jac/dkac104⟩. ⟨hal-03706359⟩
Marion Allart, Florence Leroy, Stephano Kim, David Sefrioui, Mihane Nayeri, et al.. Metastatic colorectal carcinoma with signet-ring cells: Clinical, histological and molecular description from an Association des Gastro-Entérologues Oncologues (AGEO) French multicenter retrospective cohort. Digestive and Liver Disease, 2022, 54 (3), pp.391-399. ⟨10.1016/j.dld.2021.06.031⟩. ⟨hal-04522449⟩
N. Dossou, I. Gaubert, C. Moriceau, E. Cornet, S. Le Hello, et al.. Evaluation of Flow Cytometry for Cell Count and Detection of Bacteria in Biological Fluids. Microbiology Spectrum, 2022, 10 (1), ⟨10.1128/spectrum.01830-21⟩. ⟨hal-04039838⟩
Sophie Geyl, Jérémie Albouys, Marion Schaefer, Hugo Lepetit, Romain Legros, et al.. Is endoscopic mucosal resection optimum for treating colonic angiodysplasia?. Endoscopy, 2022, 54 (12), pp.1233-1234. ⟨10.1055/a-1750-9105⟩. ⟨hal-04491953⟩
Brice Mastrovito, Chloé Naimi, Leslie Kouam, Xavier Naudot, Lucie Fournier, et al.. Investigation of outbreak cases infected with the SARS-CoV-2 B.1.640 variant in a fully vaccinated elderly population, Normandy, France, November to December 2021. Eurosurveillance, 2022, 27 (6), ⟨10.2807/1560-7917.ES.2022.27.6.2200078⟩. ⟨hal-03706394⟩
Judith Hübschen, Ionela Gouandjika-Vasilache, Julia Dina. Measles. The Lancet, 2022, 399 (10325), pp.678-690. ⟨10.1016/S0140-6736(21)02004-3⟩. ⟨hal-03706415⟩
Jean-Jacques Parienti, Jessica Haberer. Forgiveness of an intermittent HIV treatment strategy. The Lancet HIV, 2022, 9 (2), pp.e68-e69. ⟨10.1016/S2352-3018(21)00322-2⟩. ⟨hal-03706422⟩
Clementine Brule, Mathieu Pioche, Jeremie Albouys, Jerome Rivory, Sophie Geyl, et al.. The COlorectal NEoplasia Endoscopic Classification to Choose the Treatment classification for identification of large laterally spreading lesions lacking submucosal carcinomas: A prospective study of 663 lesions. United European Gastroenterology Journal, 2022, 10 (1), pp.80-92. ⟨10.1002/ueg2.12194⟩. ⟨hal-04504208⟩
Marion Aubourg, Marine Pottier, Albertine Léon, Benoit Bernay, Anne Dhalluin, et al.. Inactivation of the Response Regulator AgrA Has a Pleiotropic Effect on Biofilm Formation, Pathogenesis and Stress Response in Staphylococcus lugdunensis. Microbiology Spectrum, 2022, 10 (1), pp.e01598-21. ⟨10.1128/spectrum.01598-21⟩. ⟨hal-03600709⟩
Joshua H.T. Potter, Rosie Drinkwater, Kalina T.J. Davies, Nicolas Nesi, Marisa C.W. Lim, et al.. Nectar-feeding bats and birds show parallel molecular adaptations in sugar metabolism enzymes. Current Biology, 2021, 31 (20), pp.4667-4674.e6. ⟨10.1016/j.cub.2021.08.018⟩. ⟨hal-05676694⟩
Dominique Bertrand, Mouad Hamzaoui, Veronique Lemée, Julie Lamulle, Mélanie Hanoy, et al.. Antibody and T Cell Response to SARS-CoV-2 Messenger RNA BNT162b2 Vaccine in Kidney Transplant Recipients and Hemodialysis Patients. Journal of the American Society of Nephrology, 2021, 32 (9), pp.2147-2152. ⟨10.1681/ASN.2021040480⟩. ⟨hal-05156971⟩
Marion Aubourg, François Gravey, Anne Dhalluin, Jean-Christophe J.-C. Giard. Identification of the iron-limitation stimulon in Staphylococcus lugdunensis. Archives of Microbiology, 2021, 203, pp.3687 - 3694. ⟨10.1007/s00203-021-02342-2⟩. ⟨hal-05447132⟩
Christophe Isnard, Sara Hernandez, François Guérin, Fanny Joalland, Didier Goux, et al.. Unexpected cell wall alteration-mediated bactericidal activity of the antifungal caspofungin against vancomycin-resistant Enterococcus faecium. Antimicrobial Agents and Chemotherapy, 2020, 64 (10), pp.e01261-20. ⟨10.1128/AAC.01261-20⟩. ⟨hal-02930693⟩
Mathilde Réveillon-Istin, Dabor Resiere, Sandrine Dahyot, Kévin Alexandre, Hossein Mehdaoui, et al.. Cellulitis and bacteremia after a snake bite despite antibiotic preemptive treatment: A diagnosis challenge. Travel Medicine and Infectious Disease, 2020, 35 (1), pp.101555. ⟨10.1016/j.tmaid.2020.101555⟩. ⟨hal-05320317⟩
Benjamin Soudais, Matthieu Schuers, Emmanuel Lefebvre, Manuel Etienne, Lucille Pellerin. Infections urinaires masculines en soins primaires. Exercer. La revue francophone de médecine générale, 2018, 146, pp.368-7. ⟨hal-05474213⟩
Benjamin Soudais, M. Schuers, Emmanuel Lefebvre, Manuel Etienne, Lucille Pellerin. Infections urinaires masculines en soins primaires. Exercer. La revue francophone de médecine générale, 2018, 146, pp.368-373. ⟨hal-02573941⟩
Clara Sinel, Margherita Cacaci, Pierrick Meignen, François Guérin, Bryan W Davies, et al.. Subinhibitory Concentrations of Ciprofloxacin Enhance Antimicrobial Resistance and Pathogenicity of Enterococcus faecium. Antimicrobial Agents and Chemotherapy, 2017, 61, ⟨10.1128/aac.02763-16⟩. ⟨hal-05484320⟩
Clara Sinel, Clara Jaussaud, Michel Auzou, Jean-Christophe Giard, Vincent Cattoir. Mutant prevention concentrations of daptomycin for Enterococcus faecium clinical isolates. International Journal of Antimicrobial Agents, 2016, 48, pp.449 - 452. ⟨10.1016/j.ijantimicag.2016.07.006⟩. ⟨hal-05484322⟩
François Guérin, Christophe Isnard, Fiona Bucquet, Marguerite Fines-Guyon, Jean-Christophe Giard, et al.. Novel chromosome-encodederm(47) determinant responsible for constitutive MLSBresistance inHelcococcus kunzii. Journal of Antimicrobial Chemotherapy, 2016, 71, pp.3046 - 3049. ⟨10.1093/jac/dkw290⟩. ⟨hal-05484287⟩
Clara Sinel, Thibaud Cosquer, Michel Auzou, Didier Goux, Jean-Christophe Giard, et al.. Sequential steps of daptomycin resistance inEnterococcus faeciumand reversion to hypersusceptibility through IS-mediated inactivation of theliaFSRoperon. Journal of Antimicrobial Chemotherapy, 2016, 71, pp.2793 - 2797. ⟨10.1093/jac/dkw229⟩. ⟨hal-05484319⟩
Nicolas Nesi, David Jacobs, Kevin Feldheim, Jacqueline Bishop. Development and characterization of 10 microsatellite markers in the Cape horseshoe bat, Rhinolophus capensis (Chiroptera, Rhinolophidae) and cross-amplification in southern African Rhinolophus species. BMC Research Notes, 2015, 8 (1), pp.477. ⟨10.1186/s13104-015-1465-5⟩. ⟨hal-05676688⟩
Alexandre Hassanin, Souraya Khouider, Guy-Crispin Gembu, Steven M. Goodman, Blaise Kadjo, et al.. The comparative phylogeography of fruit bats of the tribe Scotonycterini (Chiroptera, Pteropodidae) reveals cryptic species diversity related to African Pleistocene forest refugia. Comptes Rendus. Biologies, 2015, 338 (3), pp.197-211. ⟨10.1016/j.crvi.2014.12.003⟩. ⟨hal-05676689⟩
Vincent Cattoir, Christophe Isnard, Thibaud Cosquer, Arlène Odhiambo, Fiona Bucquet, et al.. Genomic Analysis of Reduced Susceptibility to Tigecycline in Enterococcus faecium. Antimicrobial Agents and Chemotherapy, 2015, 59, pp.239 - 244. ⟨10.1128/aac.04174-14⟩. ⟨hal-05447409⟩
Vincent Cattoir, Jean-Christophe J.-C. Giard. Antibiotic resistance inEnterococcus faeciumclinical isolates. Expert Review of Anti-infective Therapy, 2014, 12, pp.239 - 248. ⟨10.1586/14787210.2014.870886⟩. ⟨hal-05447412⟩
Nicolas Nesi, Emmanuel Nakouné, Corinne Cruaud, Alexandre Hassanin. DNA barcoding of African fruit bats (Mammalia, Pteropodidae). The mitochondrial genome does not provide a reliable discrimination between Epomophorus gambianus and Micropteropus pusillus. Comptes Rendus. Biologies, 2011, 334 (7), pp.544-554. ⟨10.1016/j.crvi.2011.05.003⟩. ⟨hal-05676687⟩
Ferric Fang, Mary Ann Degroote, John Foster, Andreas Bäumler, Urs Ochsner, et al.. Virulent Salmonella typhimurium has two periplasmic Cu, Zn-superoxide dismutases. Proceedings of the National Academy of Sciences of the United States of America, 1999, 96 (13), pp.7502-7507. ⟨10.1073/pnas.96.13.7502⟩. ⟨hal-05484222⟩
Kyeong Park, Jean-Christophe Giard, Juno Eom, Shawn Bearson, John Foster. Cyclic AMP Receptor Protein and TyrR Are Required for Acid pH and Anaerobic Induction of hyaB and aniC in Salmonella typhimurium. Journal of Bacteriology, 1999, 181 (2), pp.689-694. ⟨10.1128/JB.181.2.689-694.1999⟩. ⟨hal-05484309⟩
Axel Hartke, Jean-Christophe Giard, Jean-Marie Laplace, Yanick Auffray. Survival of Enterococcus faecalis in an Oligotrophic Microcosm: Changes in Morphology, Development of General Stress Resistance, and Analysis of Protein Synthesis. Applied and Environmental Microbiology, 1998, 64 (11), pp.4238-4245. ⟨10.1128/AEM.64.11.4238-4245.1998⟩. ⟨hal-05484290⟩
Jacques Frère, Abdellah Benachour, Jean-Christophe J.-C. Giard, Jean-Marie Laplace, Sigrid Flahaut, et al.. A new theta-type thermosensitive replicon from Lactoccocus lactis as an integration vector for Enterococcus faecalis. FEMS Microbiology Letters, 1998, 161 (1), pp.107-114. ⟨10.1111/j.1574-6968.1998.tb12935.x⟩. ⟨hal-05484238⟩
Axel Hartke, Sandrine Bouché, Jean-Christophe Giard, Abdellah Benachour, Philippe Boutibonnes, et al.. The Lactic Acid Stress Response of Lactococcus lactis subsp. lactis. Current Microbiology, 1996, 33 (3), pp.194-199. ⟨10.1007/s002849900099⟩. ⟨hal-05484293⟩
S. Flahaut, Abdellah Benachour, Jean-Christophe J.-C. Giard, Philippe Boutibonnes, Yanick Auffray. Defense against lethal treatments and de novo protein synthesis induced by NaCl in Enterococcus faecalis ATCC 19433. Archives of Microbiology, 1996, 165 (5), pp.317-324. ⟨10.1007/s002030050333⟩. ⟨hal-05484231⟩
Jean-Christophe J.-C. Giard, Axel Hartke, Sigrid Flahaut, Abdellah Benachour, Philippe Boutibonnes, et al.. Starvation-Induced Multiresistance in Enterococcus faecalis JH2-2. Current Microbiology, 1996, 32 (5), pp.264-271. ⟨10.1007/s002849900048⟩. ⟨hal-05484243⟩
P. Boutibonnes, Jean-Christophe J.-C. Giard, A. Hartke, B. Thammavongs, Y. Auffray. Characterization of the heat shock response inEnterococcus faecalis. Antonie van Leeuwenhoek, 1993, 64 (1), pp.47-55. ⟨10.1007/BF00870921⟩. ⟨hal-05447170⟩

Communications dans un congrès85 documents

N. Dossou, D. Cerasuolo, C. Dubus, Catherine François, A. Regueme, et al.. Fardeau de l'infection à VRS chez les séniors – étude rétrospective multicentrique. 27es Journées Nationales d’Infectiologie, Jun 2026, Paris, France. pp.S159, ⟨10.1016/j.mmifmc.2026.04.331⟩. ⟨hal-05633414⟩
Matthieu Martineau, Elena Kokabi, Chervin Hassel, Albertine Léon. Caractérisation du microbiote respiratoire équin par métagénomique 16S par Oxford Nanopore. Rencontres Normandes de Microbiologie, May 2026, Caen, France. ⟨hal-05626370⟩
Xavier D’ablon, Albertine Léon. Prélèvements et diagnostic. Les 8e rencontres du RESPE - La gourme et les infections à streptocoques, RESPE, Nov 2025, Saumur, France. ⟨hal-05372281⟩
Nefert Candace Dossou, Youssef Gouait, Sandrine Corbet, Bryce Leterrier, Astrid Vabret, et al.. ARCHEOCOV : Etude archéo-épidémiologique des coronavirus HCoV-OC43 et HCoV-HKU1. FHU RESPIRE, Nov 2025, Ailly sur Noye, France. ⟨hal-05605675⟩
Eléna Kokabi, Anis Taiebi, Patrick Legendre, Erika Hue, Stéphane Pronost, et al.. Les huiles essentielles en médecine équine. 2èmes rencontres de l'Association Française d'Aromathérapie Clinique, Nov 2025, Strasbourg, France. ⟨hal-05343273⟩
Lokman Galal, Frédéric Ariey, Meriadeg M. Ar Gouilh, Marie-Laure Dardé, Azra Hamidović, et al.. Toxoplasma gondii en Amérique du Sud : un parasite zoonotique ancien, une émergence récente. France One Global Health Forum, France One Global Health Forum, Oct 2025, LYON, France. ⟨hal-05317273⟩
Albertine Léon. Notre offre Clean Clinic, la solution simple et efficace pour contrôler la qualité microbiologique de votre clinique vétérinaire.. Normandy horse meet'up 2025, Sep 2025, Deauville, France. ⟨hal-05626378⟩
Alice Moisan. Mise en place du séquençage des virus influenza à l'hôpital : retour d'expérience de trois centres utilisant différentes technologies de séquençage. Symposium grippe et virus respiratoires, SFM, Sep 2025, Bordeaux, France. ⟨hal-05498223⟩
Christophe Isnard. Characterization and physiological impacts of Enterococcus faecalis extracellular vesicles. MICROBES, SFM, Sep 2025, BORDEAUX, France. ⟨hal-05494533⟩
Chloé Dubus, Hortense Petat, Mélanie Daligault, Claire Morin, Matthieu Come, et al.. Impact des immunoprophylaxies anti-VRS sur la circulation des virus respiratoires : retour sur la saison épidémique 2024-2025. MICROBES, Société Françaises de Microbiologie, Sep 2025, Bordeaux, France. ⟨hal-05308178⟩
Simon Le Hello, Albertine Léon-Seck. Antimicrobial resistance : Human and Equine Interface. Connecting Equine health research, LABEO, Sep 2025, Caen, France. ⟨hal-05271866⟩
Matthieu Martineau, Eléna Kokabi, Chervin Hassel, Florence Tardy, Albertine Léon. Mycoplasma equirhinis, a disregarded player in equine respiratory disorders?. Connecting Equine health research, LABEO, Sep 2025, Caen, France. ⟨hal-05271741⟩
Nefert Candace Dossou. Quand la grippe arrive .. ne baissez pas la garde. Journées Normandes de Microbiologie, Jun 2025, Deauville-Trouville, France. ⟨hal-05605657⟩
Eléna Kokabi, Anis Taiebi, Camille Floquet, Patrick Legendre, Erika Hue, et al.. Premiers résultats des projets AROMAT-EQ. Journées Phyto-Vétos 2025, RéPAAS, Jun 2025, Angers, France. ⟨hal-05131456⟩
Eléna Kokabi, Oumou Boite, Maëlle Guérot, Joséphine Leprou, Nathalie Ménard, et al.. IR-Biotyper: A New Diagnostic Tool in Microbiology. International Symposium of the World Association of Veterinary Laboratory Diagnosticians (ISWAVLD), World Association of Veterinary Laboratory Diagnosticians, Jun 2025, Calgary, Canada. ⟨hal-05131433⟩
Nefert Candace Dossou, Damiano Cerasuolo, Chloé Dubus, Alice Moisan, Jean-Christophe Plantier, et al.. RSV in older adults: from infection to outcome - who gets sick, who gets hospitalized and who survives ? A multicenter retrospective study. JNRB, Jun 2025, Caen, France. ⟨hal-05605653⟩
Nefert Candace Dossou, Damiano Cerasuolo, Chloé Dubus, Alice Moisan, Jean-Christophe Plantier, et al.. RSV in older adults: From infection to outcome - who gets sickn who gets hospitalized, who survives ? A multicenter retrospective study. FHU RESPIRE, May 2025, Caen, France. ⟨hal-05605637⟩
Lokman Galal, Frédéric Ariey, Meriadeg M. Ar Gouilh, Marie-Laure Dardé, Azra Hamidović, et al.. Understanding the History of the Domestic Cycle of Toxoplasma gondii in South Africa. Séminaire de Microbiologie de Strasbourg, Ecole Doctorale Vie Santé Université Strasbourg, Apr 2025, STRASBOURG, France. ⟨hal-05082091⟩
Camille Villenave, Pr Martine Pestel-Caron, Sandrine Dahyot. Apport de la culture étendue par rapport à la culture standard dans le microbiote urinaire bactérien. 63e assemblée générale de la Fédération Nationale des Syndicats d’Internes en Pharmacie et Biologie Médicale, Fédération Nationale des Syndicats d’Internes en Pharmacie et Biologie Médicale, Mar 2025, Marseille, France. ⟨hal-05046769⟩
Manuel Etienne. Impact clinique de l’hétéro-résistance de la tolérance et de la persistance chez les Gram négatif. 44ème RICAI, Dec 2024, PARIS, France. ⟨hal-04844455⟩
Matthieu Martineau, Eléna Kokabi, Maryne Jaÿ, Albertine Léon, Florence Tardy. Diagnostic et place des mycoplasmes dans les troubles respiratoires du cheval. VIGIMYC, Nov 2024, Maisons-Alfort, France. ⟨hal-04780444⟩
Anne-Laure Mentec, Albertine Léon, Christel Marcillaud-Pitel, Coralie Lupo. Evaluation de la surveillance épidémiologique de la gourme équine conduite par le RESPE. 52ème Journées annuelles et Ateliers de l’AVEF, Association vétérinaire équine française, Nov 2024, Tours, France. ⟨hal-04780436⟩
Eléna Kokabi, Joséphine Leprou, Nathalie Ménard, Pierre-Hugues Pitel, Albertine Léon. Nouvelle approche d’évaluation de la qualité microbiologique des cliniques vétérinaires par l’utilisation de la spectroscopie infrarouge à transformée de Fourier. 52ème Journées annuelles et Ateliers de l’AVEF, Association vétérinaire équine française, Nov 2024, Tours, France. ⟨hal-04780420⟩
Simon Le Hello, Marine Pottier, L. Rodrigues, François Gravey, Sandrine Petry, et al.. Involvement of Pseudomonas aeruginosa in human and animal health in Normandy: Resistance, adaptation factors, and biofilm. 12th International Equine Infectious Diseases Conference, Sep 2024, Deauville, France. pp.25 (n°24), ⟨10.1111/evj.14215⟩. ⟨hal-04723377⟩
Alix Carpentier, Lorane Le Franc, Anis Taiebi, Manon Duchatellier, Kristine Klewer, et al.. Review of the use of PCR for diagnosis of contagious equine metritis: The case of non-reproducible Klebsiella positive samples in France in 2024. 12th International Equine Infectious Diseases Conference, Sep 2024, Deauville, France. pp.28-29 (n°31), ⟨10.1111/evj.14215⟩. ⟨hal-04723470⟩
Alix Carpentier, Océane Mercier, Rémy Bonjour, Kristine Klewer, Philippe Pourquier, et al.. Strangles outbreaks management with a new double antigen ELISA. 12th International Equine Infectious Diseases Conference, Sep 2024, Deauville, France. pp.35-36 (n°46), ⟨10.1111/evj.14215⟩. ⟨hal-04723950⟩
Hayley Wilson, Andries J. van Tonder, Christopher Ruis, Noémie Lefrancq, Abigail McGlennon, et al.. Pinning the tail of the evolution of Streptococcus equi in populations of horses and donkeys. 12th International Equine Infectious Diseases Conference, Sep 2024, Deauville, France. pp.23 (n°20), ⟨10.1111/evj.14215⟩. ⟨hal-04723315⟩
François Gravey, Corinne Sévin, Sophie Castagnet, Nathalie Foucher, Karine Maillard, et al.. Antimicrobial resistance and genetic diversity of Klebsiella pneumoniae from different clinical sources in horses. 12th International Equine Infectious Diseases Conference, Sep 2024, Deauville, France. pp.34-35 (n°42). ⟨hal-04723920⟩
Eléna Kokabi, Joséphine Leprou, Nathalie Ménard, Pierre-Hugues Pitel, Albertine Léon. New approaches for evaluation of microbiological quality in equine clinics using Fourier transform infrared spectroscopy. 12th International Equine Infectious Diseases Conference, Sep 2024, Deauville, France. pp.28-29 (n°31), ⟨10.1111/evj.14215⟩. ⟨hal-04723439⟩
Coralie Lupo, Christine Fortier, Eléna Kokabi, Albertine Léon, Stéphane Pronost, et al.. Laboratory network surveillance of equine diseases. 12th International Equine Infectious Diseases Conference, Sep 2024, Deauville, France. pp.79 (n°125), ⟨10.1111/evj.14215⟩. ⟨hal-04724006⟩
Matthieu Martineau, Eléna Kokabi, Chloé Ambroset, Marine Jay, Florence Tardy, et al.. Mycoplasma equirhinis, a disregarded player in equine respiratory disorders?. 12th International Equine Infectious Diseases Conference, Sep 2024, Deauville, France. pp.24-25 (n°23), ⟨10.1111/evj.14215⟩. ⟨hal-04723332⟩
Albertine Léon. Effet des huiles essentielles pour la médecine vétérinaire équine comme thérapie alternative. Normandie Horse Meet'Up, Sep 2024, Deauville, France. ⟨hal-04708830⟩
Maxime Bruto, Albertine Léon, Matthieu Martineau, Florence Tardy, Fabien Labroussaa, et al.. Hotspot of recombination in Metamycoplasma equirhinis: evidence of multiple horizontal gene transfer events originating from bacteria sharing the same ecological niche. 25th Congress of the International Organization for Mycoplasmology (IOM 2024), International Organization for Mycoplasmology, Jul 2024, Gran Canaria, Spain. pp.Communication orale. ⟨anses-04856839⟩
Matthieu Martineau, Eléna Kokabi, Chloé Ambroset, Maryne Jaÿ, Albertine Léon, et al.. Mycoplasma equirhinis, a neglected player in equine respiratory disorders ?. 25th Congress of the International Organization for Mycoplasmology (IOM 2024), International Organization for Mycoplasmology, Jul 2024, Gran Canaria, Spain. pp.Communication orale. ⟨anses-04856798⟩
Nefert Candace Dossou, Estelle Leperchois, Bryce Leterrier, Astrid Vabret, Meriadeg M. Ar Gouilh. Genomic analysis of measles virus: uncovering molecular evolutionary dynamics and factors driving resurgence. JNRB, Jun 2024, Caen, France. ⟨hal-05604909⟩
Eléna Kokabi, Anis Taiebi, Patrick Legendre, Erika Hue, Stéphane Pronost, et al.. Les huiles essentielles pour la médecine vétérinaire équine. Journées sciences et innovations équines, IFCE, May 2024, Saumur, France. ⟨hal-04607241⟩
Nefert Candace Dossou, Estelle Leperchois, Bryce Leterrier, Astrid Vabret, Meriadeg M. Ar Gouilh. La rougeole démasquée: diversité des génotypes, sélection et recombinants. 4e journée scientifique de la FHU RESPIRE, May 2024, Caen, France. ⟨hal-05604907⟩
Nefert Candace Dossou, Estelle Leperchois, Bryce Leterrier, Astrid Vabret, Meriadeg M. Ar Gouilh. La rougeole démasquée: diversité des génotypes, sélection et épidémies. Journées Francophones de Virologie, Apr 2024, Bruxelles (Belgique), Belgique. ⟨hal-05604897⟩
Nefert Candace Dossou, Estelle Leperchois, Bryce Leterrier, Astrid Vabret, Meriadeg M. Ar Gouilh. Unraveling the measles puzzle: genotypes shifting landscapes, selection and recombinants. VIRUSES, Feb 2024, Barcelone (Espagne), Spain. ⟨hal-05604892⟩
Nefert Candace Dossou, Estelle Leperchois, Bryce Leterrier, Astrid Vabret, Meriadeg M. Ar Gouilh. Analyse phylodynamique du virus de la rougeole: dynamique évolutive et moléculaire et facteurs de résurgence. RICAI, Dec 2023, Paris, France. ⟨hal-05604878⟩
Benjamin Soudais, Florian Ribeaucoup, Matthieu Schuers. Guide de bonnes pratiques sur la prise en charge des infections urinaires masculines en soins primaires. Une revue systématique de littérature. Congrès National des Généralistes Enseignants, CNGE, Dec 2023, Lyon, France. ⟨hal-05473930⟩
Nefert Candace Dossou, Estelle Leperchois, Bryce Leterrier, Astrid Vabret, Meriadeg Le Gouilh. Genomic analysis of measles virus: uncovering molecular evolutionary dynamics and factors driving resurgence. MEEGID, Nov 2023, Dresden (GERMANY), Germany. ⟨hal-05604857⟩
Matthieu Martineau, Eléna Kokabi, Maryne Jaÿ, Florence Tardy, Albertine Léon. Rôle des mycoplasmes dans les affections respiratoires équines. 51ème Journées annuelles de l’Association vétérinaire équine française, Nov 2023, Toulouse, France. ⟨hal-04283145⟩
Léadisaelle Hosanna Lenguiya, Matthieu Fritz, Daphné de Riols de Fonclare, Sandrine Corbet, Pierre Becquart, et al.. Risks of SARS-CoV-2 endemization in wildlife from the Republic of the Congo. Symposium international sur les maladies zoonotiques émergentes et réémergentes, Organisation mondiale de la santé animale (OMSA); Institut Pasteur; Institut de Recherche pour le Développement (IRD); Centre de coopération internationale en recherche agronomique pour le développement (CIRAD), Oct 2023, Mbour, Senegal. pp.14. ⟨hal-04994590⟩
Linda Bohou Kombila, Pierre Becquart, Telstar Ndong Mebaley, Aurélie Pédarrieu, Déborah Garcia, et al.. Evidence for circulation of Rift Valley fever virus in wildlife in a forest environment in Gabon, central Africa. Symposium international sur les maladies zoonotiques émergentes et réémergentes, Organisation mondiale de la santé animale (OMSA); Institut Pasteur; Institut de Recherche pour le Développement (IRD); Centre de coopération internationale en recherche agronomique pour le développement (CIRAD), Oct 2023, Mbour, Senegal. pp.15. ⟨hal-04994609⟩
Maria-Alexandra Stoica, Guillemette Unal, Fabienne De Oliveira, Elodie Alessandri-Gradt, Jean-Christophe Plantier, et al.. APOBEC3G editing in HIV-1 group O genomes. MICROBES, Société Française de Microbiologie, Oct 2023, Rennes, France. ⟨hal-05046546⟩
Nefert Candace Dossou, Estelle Leperchois, Bryce Leterrier, Astrid Vabret, Meriadeg M. Ar Gouilh. Nouvelles perspectives sur l'évolution du virus de la rougeole: phénomènes de sélection et résurgences épidémiques. MICROBES, Oct 2023, Rennes, France. ⟨hal-05604842⟩
Matthieu Martineau, Eléna Kokabi, Maryne Jaÿ, Albertine Léon, Florence Tardy. Role of mycoplasma in equine respiratory disorders. Journées Scientifiques et Doctorales de l'Anses, ANSES, Oct 2023, Maisons-Alfort, France. ⟨hal-04227824⟩
Albertine Léon, Clément Pillon, Inès Tebourski, Jean‐françois Bruyas, Coralie Lupo. Invited Review: Overview of the causes of abortion in horses, their follow-up, and management.. First european symposium on animal reproduction (ESAR conference 2023), European society for domestic animal reproduction (ESDAR), Sep 2023, Nantes, France. ⟨hal-04218354⟩
Albertine Léon, Sophie Castagnet, Eléna Kokabi, Marine Pottier. New methods to characterize bacterial biofilm, the example of Streptococcus equi. International symposium of the world association of veterinary laboratory diagnosticians, Jun 2023, Lyon, France. ⟨hal-04148707⟩
Matthieu Martineau, Eléna Kokabi, Maryne Jaÿ, Florence Tardy, Albertine Léon. Rôle des mycoplasmes dans les affections respiratoires équines. Prix du meilleur thésard 2023 du Pôle Hippolia, Pôle Hippolia, Jun 2023, Tourgeville, France. ⟨hal-04167243⟩
J. Manifacier, François Gravey, Miriam Cordovana, M. Fines-Guyon, S. Hecht, et al.. Apport de la spectroscopie infrarouge dans le suivi de la diffusion hospitalière d’entérobactéries productrices de carbapénèmases. JNRB, Jun 2023, Caen, France. ⟨hal-05528692⟩
Elodie Alessandri-Gradt, Samuel Constant, Jean-Christophe Plantier, Georgios Stroulios, Stroulios Simmini, et al.. Génération d’organoïdes respiratoires avec exposition apicale externe. Journées normandes de recherche biomédicale, Jun 2023, Caen, France. ⟨hal-04276950⟩
Albertine Léon, Matthieu Martineau, Florence Tardy. Les mycoplasmes respiratoires équins. Journées nationales des groupements techniques vétérinaires, Société nationale des groupements techniques vétérinaires, May 2023, Poitiers, France. ⟨hal-04167253⟩
Benjamin Soudais. Mesure au cabinet / automesure / MAPA ? Comment diagnostiquer et suivre nos patients hypertendus ?. Hypertension artérielle : quoi de neuf en 2023 ?, CHU de Rouen - Néphrologie, May 2023, Rouen, France. ⟨hal-05478903⟩
Marion Giry, Kévin Alexandre. IMPLÉMENTATION DU MODÈLE HFIM EN NORMANDIE. Rencontres Normandes de Microbiologie, May 2023, Rouen (Université de Rouen Normandie), France. ⟨hal-04185170⟩
Albertine Léon-Seck. La microbiologie vétérinaire, un axe majeur de recherche One Health en Normandie. Journée de rencontres normandes de Microbiologie, May 2023, Rouen, France. ⟨hal-04167198⟩
Albertine Léon, Sophie Castagnet, Eléna Kokabi, Marine Pottier, Jean-Christophe Giard. Ability of biofilm formation of Streptococcus equi isolates from accute and asymptomatic carrier strangles horses. Workshop Havemeyer, Ashley Boyle, May 2023, Mendenhall, United States. ⟨hal-04148883⟩
Matthieu Martineau, Eléna Kokabi, Maryne Jaÿ, Florence Tardy, Albertine Léon. Association of Streptococcus equi subsp. zooepidemicus and Mycoplasma spp. in equine respiratory infections. Workshop Havemeyer, Ashley Boyle, May 2023, Mendenhall, United States. ⟨hal-04095078⟩
Nefert Candace Dossou. Syndrome de Guillain-Barré post infection par le virus de la dengue. Journées Normandes de Microbiologie, May 2023, Deauville-Trouville, France. ⟨hal-05604820⟩
Alice Michel, Jean-Christophe Plantier, Chervin Hassel. "Microbiosthme" : Upper and lower airway microbiomes analysis in infants with severe asthma. Journées de l'Ecole Doctorale Normande de Biologie Intégrative Santé et Environnement - 25ème édition, Ecole Doctorale normande de Biologie Intégrative, Santé, Environnement, Apr 2023, Rouen, France. ⟨hal-04123546⟩
Camille Villenave, Sandrine Dahyot, Martine Pestel-Caron. Characterization of the urinary microbiome in non-menopausal women with and without urinary tract infection. Journées de l'Ecole Doctorale Normande de Biologie Intégrative Santé et Environnement - 25ème édition, Ecole Doctorale normande de Biologie Intégrative, Santé, Environnement, Apr 2023, Rouen, France. ⟨hal-05046740⟩
Alice Michel, Chervin Hassel, Jean-Christophe Plantier. Upper and lower respiratory tract microbiomes analysis in infants with severe asthma. Congrès de la FHU RESPIRE, Fédération Hospitalo-Universitaire RESPIRE, Nov 2022, Forges-les-Eaux, France. ⟨hal-04123385⟩
Marine Pottier, Sophie Castagnet, François Gravey, Michel Auzou, Guillaume Leduc, et al.. Pseudomonas aeruginosa en médecine vétérinaire : diversité génomique et point sur la résistance aux antibiotiques et désinfectants par une approche One health. 50èmes Journées annuelles de l'AVEF, Association Vétérinaire Equine Française, Nov 2022, Reims, France. ⟨hal-03845633⟩
Eléna Kokabi, Sophie Castagnet, Patrick Legendre, Erika Hue, Stéphane Pronost, et al.. Evaluation de l’effet antimicrobien d’huiles essentielles pour la médecine vétérinaire équine comme thérapie complémentaire. 50ème Journées annuelles de l'AVEF, Association Vétérinaire Equine Française, Nov 2022, Reims, France. ⟨hal-03845665⟩
Matthieu Martineau, Sophie Castagnet, Eléna Kokabi, Agnès Tricot, Marine Jaÿ, et al.. Les mycoplasmes dans les pathologies respiratoires équines. 50èmes Journées annuelles de l'AVEF, Association Vétérinaire Equine Française, Nov 2022, Reims, France. ⟨hal-03845681⟩
Matthieu Martineau, Sophie Castagnet, Eléna Kokabi, Agnès Tricot, Maryne Jay, et al.. Les mycoplasmes dans les pathologies respiratoires équines. Journées sciences et innovations équines 2022, IFCE, Jun 2022, Saumur, France. ⟨hal-03690326⟩
Matthieu Martineau, Sophie Castagnet, Eléna Kokabi, Anne Tricot, M. Jaÿ, et al.. Characterisation of Mycoplasma spp. detected in 2020/2021 from respiratory tract samples of horses in France. Journées de l'Ecole Doctorale Normande de Biologie Intégrative, Santé, Environnement (JEDnBISE), Jun 2022, Online Conference, France. ⟨hal-04764625⟩
Marine Pottier, Sophie Castagnet, François Gravey, Michel Auzou, Guillaume Leduc, et al.. Pseudomonas aeruginosa en médecine vétérinaire : diversité génomique et point sur la résistance aux antibiotiques et désinfectants par une approche One health. Finaliste du prix du meilleur thésard 2022, Journée des membres du Pôle Hippolia, Pôle Hippolia, May 2022, Deauville, France. ⟨hal-03845710⟩
Alice Moisan. Transmission et circulation d’un recombinant SARS-CoV-2 Deltacron XD en Normandie. Journée de la FHU Respire, FHU Respire, May 2022, Online, France. ⟨hal-05498225⟩
Coralie Lupo, Marie Delerue, Christel Marcillaud-Pitel, Jean-François Bruyas, Aurélie Merlin, et al.. Evaluation of register data to distinguish potential epidemic transitions from population structure changes: example of abortion surveillance in French equids.. 4th International Conference on Animal Health Surveillance, May 2022, Copenhagen, Denmark. ⟨hal-03845607⟩
Nefert Candace Dossou. Syndrome de Guillain-Barré post infection à Hépatite E. Journées Normandes de Microbiologie, Oct 2021, Deauville-Trouville, France. ⟨hal-05604746⟩
Astrid Vabret, Meriadeg Le Gouilh, Simon Le Hello, Stéphane Pronost. Tout ce que vous avez toujours voulu savoir sur les microbes sans jamais oser le demander. Table ronde Microbes et santé globale, Fête de la Science, Oct 2021, Caen, France. ⟨hal-04764960⟩
Albertine Léon, Fabienne Benoit. Plan écoantibio : les réponses du laboratoire. Colloque Ecoantibio 2021, 2021, Webinaire, France. ⟨hal-04764628⟩
Albertine Léon. Situation of strangles in France and (new) diagnostic tools to detect asymptomatic carrier. 1st European Meeting Equine Infectious Disease (EMEID), Nov 2019, Caen, France. ⟨hal-04761722⟩
Nefert Candace Dossou. Bactériémies à Lactobacillus. Journées Normandes de Microbiologie, Jun 2019, Deauville-Trouville, France. ⟨hal-05604738⟩
Antoine Géry, Audrey Mouet, Annie Lemarié, Céline Bazin, Antoine Bidon, et al.. Résistance aux biocides des souches Pseudomonas productrices de carbapènémases de type VIM-2 : impact sur les détergents-désinfectants usuels. Congrès National de la Société Française d’Hygiène Hospitalière (SF2H), Jun 2019, Strasbourg, France. ⟨hal-04773040⟩
Sarah Sébire, Coralie Lagy, Sophie Castagnet, Sophie Pradier, Romain Paillot, et al.. Comparison of diagnostic tests to improve detection of Streptococcus equi subsp equi and management of strangles epizooties in France.. Getting to grips with Stangles and other Streptococcal diseases, 2019, Rekjavik, Iceland. ⟨hal-04762270⟩
Jean-Christophe Giard, Albertine Léon, Rachel Duchesne, Sophie Castagnet, Sophie Petry, et al.. Antimicrobial susceptibility of equine clinical isolates from France (2006-2016). 2nd European ONE HEALTH Conference, 2019, Bucarest, Romania. ⟨hal-04761775⟩
Sophie Castagnet, Romain Paillot, Sarah Sébire, Coralie Lagy, Sophie Pradier, et al.. Excréteurs asymptomatiques de S. equi (Gourme) : effet hôte, effet souche ou biofilm ?. 47ème journées annuelles de l’AVEF, 2019, Tours, France. ⟨hal-04764654⟩
Sophie Castagnet, Romain Paillot, Sarah Sébire, Coralie Lagy, Sophie Pradier, et al.. Biofilm formation as persistence process of Streptococcus equi sbsp equi in guttural pouches of asymptomatic carrier strangles horses?. Getting to grips with Stangles and other Streptococcal diseases, 2019, Rekjavik, Iceland. ⟨hal-04762276⟩
Sarah Sébire, Coralie Lagy, Sophie Castagnet, Sophie Pradier, Romain Paillot, et al.. Quels outils aujourd'hui pour le diagnostic de la Gourme ?. 47ème journées annuelles de l’AVEF, 2019, Tours, France. ⟨hal-04764659⟩
M Nassar, C Louste, A Michel, M Daaboul. Etude de la variation des propriétés électriques du HFE en fonction de la température. 11ème conférence de la société française d’électrostatique, G2ELAB et la société française d’électrostatique, Aug 2018, Grenoble, France. ⟨hal-05540235⟩
Lucille Pellerin, Benjamin Soudais, Matthieu Schuers, Emmanuel Lefebvre, Manuel Etienne. Efficacité de la fosfomycine dans les infections urinaires masculines (étude FOMUTI). Une étude interventionnelle en soins primaires. Congrès National des Généralistes Enseignants, Dec 2017, Montpellier, France. ⟨hal-05474356⟩
Albertine Léon, Alexandre Champin, Sophie Castagnet, Sophie Pradier, Jean-Christophe Giard. Comparison of diagnostic tests to improve detection of Streptococcus equi subsp equi and management of strangles epizooties in France. Havemeyer Foundation Workshop : Getting to grips with Stangles and other Streptococcal diseases, 2017, Montana, United States. ⟨hal-04762285⟩

Poster de conférence95 documents

A Michel, M Leoz, H Petat, N Nesi, C Marguet, et al.. Optimizing bioinformatics pipeline for both upper and lower respiratory microbiome analysis through short-read metatranscriptomic sequencing. Congress of the European Society of Clinical Microbiology and Infectious Diseases, Apr 2026, Munich, Germany. ⟨hal-05625715⟩
Amélie Robinet, Mathieu Surlemont, Benjamin Soudais. Intéractions entre assistants de régulation médicale et opérateurs de soins non programmés du service d’accès aux soins 76a : une étude qualitative. 25ème CNGE, Dec 2025, Toulouse, France. ⟨hal-05473899⟩
Elsa Fagot Griffin, Elise Douville, Marine Prieur, Benjamin Soudais. Interactions entre régulateurs et effecteurs au sein du SAS du Havre : phase qualitative de l’étude SAS LH. 25ème CNGE, Dec 2025, Toulouse, France. ⟨hal-05473868⟩
Arthur Gaujac, Julien Grosjean, Olivia Guerin, Benjamin Soudais. Délivrance du vaccin anti-méningocoque de type B en France : étude rétrospective sur bases de données nationales. 25ème CNGE, Dec 2025, Toulouse, France. ⟨hal-05473910⟩
Marthe Leoz, Johan Brière, Marie Leoz, Camille Villenave, Pr Martine Pestel-Caron, et al.. Quel modèle et quelle base de données 16S pour l'analyse du microbiome urinaire bactérien?. FrogsDays, Dec 2025, Castanet Tolosan, France. ⟨hal-05410827⟩
Chloé Dubus, Hortense Petat, Melanie Daligault, Claire Morin, Matthieu Come, et al.. Evolution of the virus landscape in infants suffering from acute bronchiolitis: a cohort story. ESCV, Sep 2025, Thessalokini, Greece. 2024. ⟨hal-05269308⟩
Chloé Dubus, Alice Moisan, Hortense Petat, Mélanie Daligault, Claire Morin, et al.. Evolution of the virus landscape in infants suffering from acute bronchiolitis : a cohort story. 27th ESCV 2025, Sep 2025, Thessaloniki, Greece. 2024. ⟨hal-05489004⟩
Pascal Thibon, Mikael Dusenne, L Messidor, Masik Johann, Benjamin Soudais, et al.. Indicateurs de pertinence de la prescription des antibiotiques en soins primaires : évaluation à partir d'un entrepôt de données de consultations de médecine générale. 26es Journées Nationales d'Infectiologie, Jun 2025, Tours, France. Volume 9071 (1002), pp.S1-S186. ⟨hal-05473852⟩
Pierre Spilmont, Guillemette Unal, Anaïs Lesourd, Stéphanie Robaday-Voisin, Yasmine Debab, et al.. Association Dolutegravir/Doravirine : une option de bithérapie ? Étude TI-PI monocentrique sur 30 PVVIH. 26èmes Journées Nationales d’Infectiologie, Jun 2025, Deauville, France. 4 (2), pp.S146, 2025, ⟨10.1016/j.mmifmc.2025.04.306⟩. ⟨hal-05498186⟩
Chloé Dubus, Hortense Petat, Fabienne Tombette, Caroline Goudin, Elodie Alessandri-Gradt, et al.. Validation de la détection et la quantification des virus respiratoires dans les sécrétions des voies aériennes supérieures obtenue par désobstruction rhinopharyngée. Journée Normande de Recherche Biomédicale, Jun 2025, Caen, France. ⟨10.1186/s12879-017-2225-6⟩. ⟨hal-05222726⟩
C Villenave, G Roussel, S Dahyot, M Pestel-Caron. Microbiote urogénital de la femme jeune : diversité bactérienne et facteurs associés. Journée Normande de Recherche Biomédicale, Jun 2025, Caen, France. 2025. ⟨hal-05046961⟩
Clara Lecourt, Hortense Petat, Marie Leoz, Christophe Marguet, Jean-Christophe Plantier, et al.. Upper and lower respiratory microbiome dynamics associated with severe asthma in infants. Journée Normande de Recherche Biomédicale, Jun 2025, Caen, France. ⟨hal-05222715⟩
Paul Banto, Zakasoa-Mbololona Ravaoarisaina, Marion Lefebvre, Hélène Marini, Marion Lottin, et al.. Description des variants SARS CoV 2 détectés dans les clusters de COVID 19 nosocomiaux au CHU de Rouen pendant l’hiver 2024 2025. Journée Normande de Recherche Biomédicale (JNRB 2025), Jun 2025, Caen, France. ⟨hal-05308146⟩
C Villenave, Gaëlle Roussel, S Dahyot, M Pestel-Caron. Microbiote urogénital féminin divers en culturomique : en lien avec des facteurs d'hôte ?. Rencontres Normandes de Microbiologie, Apr 2025, Rouen, France. ⟨hal-05222700⟩
C Villenave, G Roussel, S Dahyot, M Pestel-Caron. Microbiote urogénital féminin divers en culturomique : en lien avec des facteurs d'hôte ?. Rencontre Normande de Microbiologie, Apr 2025, Evreux, France. 2025. ⟨hal-05046965⟩
Clément Marlat, Marion Giry, Charles Baulier, Manuel Etienne, François Gravey, et al.. In Vitro efficacy of Cefepime/Enmetazobactam against AmpC ßlactamase-producing Enterobacterales. ECCMID, Apr 2025, Vienne, Austria. ⟨hal-05222646⟩
Marion Giry, Clément Marlat, Charles Baulier, Fabien Lamoureux, Ariella Ganem, et al.. Efficacy of different Piperacillin-Tazobactam -Amikacin regimens against ESBL Escherichia coli in a Hollow Fiber Infection Model simulating sepsis augmented renal clearance. ECCMID, Apr 2025, Vienne, Austria. ⟨hal-05222678⟩
Marion Giry, Clément Marlat, Charles Baulier, Fabien Lamoureux, François Gravey, et al.. Effect of augmented renal clearance on in vitro bactericidal activity of Cefepime-Enmetazobactam against ESBL-producing Escherichia coli evaluated via a mechanism-based modeling. ECCMID, Apr 2025, Vienne, Austria. ⟨hal-05222657⟩
Julien Auclaire, Sandrine Corbet, Bryce Leterrier, Isidore Gaubert, Justine Hamel, et al.. SARS-CoV-2 evolution in patients with prolong viral shedding. ECCMID, Apr 2025, Vienne (Austria), Austria. ⟨hal-05604900⟩
Kévin Alexandre, C Sauco Carballo, M Murillo-Torres, F Docobo Perez, J M Rodriguez, et al.. Effect of pH on the bacteriostatic and bactericidal activities of Delafloxacin against Escherichia coli isogenic strains harboring diverse chromosomal and plasmid-mediated fluoroquinolone resistance mechanisms. ECCMID, Apr 2025, Vienne, Austria. ⟨hal-05222690⟩
C Villenave, G Roussel, S Dahyot, M Pestel-Caron. Female urinary microbiota characterisation by culturomics. Congress of European Society of Clinical Microbiology and Infectious Diseases, Apr 2025, Vienna (AUSTRIA), Austria. ⟨hal-05046109⟩
Nassim Boutouchent, Inspire Consortium, Sean P Kennedy. Antibiotic resistance genes diversity and antimicrobial effects in the vaginal microbiome during pregnancy. 3rd P2M Rouen International Symposium : Pathways to PRECISION MEDECINE symposium, Apr 2025, Rouen, France. ⟨hal-05222629v1⟩
Elodie Alessandri-Gradt, Mathieu Hubert, Flora Archambault, Fabienne Tombette, Yves Cambet, et al.. Unveiling Pathological Insights and Accelerating Antiviral Drug Discovery in Respiratory Viral Infections with Polarized Organoids. THE THIRD P2M ROUEN INTERNATIONAL SYMPOSIUM -Pathways to PRECISION MEDECINE, Apr 2025, Rouen, France. ⟨hal-05065776⟩
Elodie Alessandri-Gradt, Mathieu Hubert, Flora Archambault, Fabienne Tombette, Yves Cambet, et al.. Unveiling Pathological Insights and Accelerating Antiviral Drug Discovery in Respiratory Viral Infections with Polarized Organoids. Pathways to Precision Medicine, Apr 2025, Rouen (France), France. ⟨hal-05267358⟩
C Villenave, G Roussel, S Dahyot, M Pestel-Caron. Female urinary microbiota composition and its relationship to clinical paramaters. THE THIRD P2M ROUEN INTERNATIONAL SYMPOSIUM, Apr 2025, Rouen, France. ⟨hal-05046110⟩
Boris Derman, Jeanne Pfister, Fanny Lermechain, Caroline Goudin, Jean-Christophe Plantier, et al.. SHIFTING PARADIGMS : Doravirine's Potential in Treating Non group M HIV 1, the DORAVI O study. CROI, Mar 2025, San Francisco CA, United States. ⟨hal-05222709⟩
Camille Villenave, Sandrine Dahyot, Gaëlle Roussel, Martine Pestel-Caron. Apport de la culturomique dans l'étude du microbiote urinaire. Réunion Interdisciplinaire de Chimiothérapie Anti-Infectieuse, Dec 2024, Paris, France. ⟨hal-05046107⟩
Alice Michel, Marie Leoz, Nicolas Nesi, Meriadeg M. Ar Gouilh, Hortense Petat, et al.. Impact of micro-organism RNA extraction from respiratory samples on microbiome analysis using Nanopore NGS technology. 9th International Conference on Clinical Metagenomics, Nov 2024, Geneva, Switzerland. ⟨hal-05046469⟩
Nefert Candace Dossou, Estelle Leperchois, Bryce Leterrier, Astrid Vabret, Meriadeg M. Ar Gouilh. Unraveling the measles puzzle: genotypes shifting landscapes and selection. CNRS Jacques MONOD, Oct 2024, Roscoff, France. ⟨hal-05604913⟩
Eléna Kokabi, Anis Taiebi, Patrick Legendre, Erika Hue, Stéphane Pronost, et al.. Characterisation of the antimicrobial effect of essential oils for equine veterinary medicine as a complementary therapy. 12th International Equine Infectious Diseases Conference, Sep 2024, Deauville, France. Equine Vetenary Journal, 56 (Suppl. 60), pp.96-97 (n°157), ⟨10.1111/evj.14215⟩. ⟨hal-04724242⟩
Alice Michel, Marie Leoz, Nicolas Nesi, Meriadeg M. Ar Gouilh, Hortense Petat, et al.. Impact of micro-organism RNA extraction from respiratory samples on microbiome analysis using Nanopore NGS technology. 26th Annual Conference of the European Society for Clinical Virology, Sep 2024, Frankfurt Am Main, Germany. ⟨hal-05046458⟩
François Caron, Christophe Isnard, Pascal Thibon, Tiffanie Belveyre, Jocelyne Caillon, et al.. Nouvelle catégorisation EUCAST/CA-SFM de l’antibiogramme : enquête nationale « InouI » pointant des difficultés tant pour les laboratoires que pour les prescripteurs. 25es Journées Nationales d'Infectiologie, Jun 2024, Deauville, France. ⟨hal-04669522⟩
Flora Archambault, Fabienne Tombette, Magalie Benard, Ludovic Galas, Caroline Tapparel, et al.. Respiratory organoids models from bronchial cells of asthmatic patients : Fabrication and study of viral infection permissivity. Journées normandes de recherche biomédicale (JNRB), Jun 2024, Rouen, France. . ⟨hal-04615618⟩
Alice Michel, Marie Leoz, Nicolas Nesi, Meriadeg Le Gouil, Hortense Petat, et al.. RNA extraction optimization for both microbiome and virome analysis. Journée Normande de Recherche Biomédicale, Jun 2024, Rouen, France. ⟨hal-04617878⟩
C Martin-Duval, S Dahyot, I Coquisart, J C Giard, M Pestel-Caron. Impact of genomic adaptation on stress response and virulence of sequential urinary isolates of Pseudomonas aeruginosa. Journée Normande de Recherche Biomédicale, Jun 2024, Rouen, France. ⟨10.1046/j.1472-765X⟩. ⟨hal-04669498⟩
F Degrémont, C Villenave, M Leoz, S Dahyot, M Pestel-Caron. Caractérisation et isolement des Lactobacillus dans le microbiote urinaire. Journée Normande de Recherche en Microbiologie, Jun 2024, Rouen, France. ⟨hal-04669526⟩
C Villenave, Sandrine Dahyot, Gaëlle Roussel, Martine Pestel-Caron. Apport de la culture étendue par rapport à la culture standard dans l'étude du microbiote urinaire bactérien. Journée Normande de Recherche Biomédicale, Jun 2024, Rouen, France. ⟨hal-04669492⟩
Boris Derman, Elodie Alessandri-Gradt, Jeanne Pfister, Fanny Lermechain, Caroline Goudin, et al.. Sensibilité phenotypique naturelle des VIH-1 non-M à la Doravirine: étude DORAVI-O. Journée Normande de Recherche Biomédicale, Jun 2024, Rouen, France. ⟨hal-04669499⟩
Flora Archambault, Fabienne Tombette, Magalie Benard, Ludovic Galas, Caroline Tapparel, et al.. Fabrication and Potential Use of Apical-Out Bronchial Organoids from Asthmatic Patients for Viral Infection Studies. Journée Normande de Recherche Biomédicale, Jun 2024, Rouen, France. ⟨hal-04669511⟩
Matthieu Martineau, Eléna Kokabi, Anis Taiebi, Stephanie Lefebvre, Sophie Pradier, et al.. Etude épidémiologique des mycoplasmes dans les affections respiratoires équines. Journées sciences et innovations équines, May 2024, Saumur, France. ⟨hal-04607289⟩
Clara Lecourt, Caroline Duval, Sandrine Dahyot, Jean-Christophe J.-C. Giard, Martine Pestel-Caron. Transcriptomic analysis of early and late clinical isolates Pseudomonas aeruginosa adaptation to the urinary tract. Journée Normande de Recherche en Microbiologie, May 2024, Rouen, France. ⟨hal-04669531⟩
Bertille Deseille, Jean-Philippe Leroy, André Gillibert, Hortense Petat, Véronique Lemée, et al.. Can we see early effects of nirsevimab in Normandy?. 42nd Annual Meeting of the European Society for Paediatric Infectious Diseases (ESPID), May 2024, Copenhagen, Denmark. ⟨hal-05046463⟩
Bertille Deseille, Jean-Philippe Leroy, Franklin Ducatez, André Gillibert, Hortense Petat, et al.. Utilisation de données cliniques issues de l'Entrepôt de Données de Santé Normand (EDSaN) pour la surveillance active des bronchiolites après le déploiement du Nirsevimab en Normandie. Congrès de la Société Française de Pédiatrie, May 2024, Nantes, France. ⟨hal-05046477⟩
Mathilde Dubuc, Simon Le Hello, Nefert Candace Dossou, Damasie Malandain. Direct Gram staining replaced by a flow cytometer to save time. ECCMID, Apr 2024, Barcelone (Espagne), Spain. ⟨hal-05604905⟩
Cotet Camille, Creach Anne-Emeline, Tenouri Marwan, Guillaume Leduc, Galopin Sébastien, et al.. Discordance of Roseomonas mucosa antibiotic resistance profiles according to susceptibility testing method. 34th ECCMID, Apr 2024, Barcelone (Espagne), Spain. ⟨hal-05222607⟩
Camille Villenave, Marie Leoz, Sandrine Dahyot, Maxime Grand, Chervin Hassel, et al.. Optimization of Urinary Microbiome Analysis from 16S Sequencing Data. European Congress of Clinical Microbiology and Infectious Diseases (ECCMID 2024), Apr 2024, Barcelone, Spain. . ⟨hal-05046659⟩
Caroline Martin-Duval, Sandrine Dahyot, Inès Coquisart, Jean-Christophe J.-C. Giard, Martine Pestel-Caron. Impact of genomic adaptation on stress response and virulence of sequential urinary isolates of Pseudomonas aeruginosa. ECCMID, Apr 2024, Barcelone (ES), Spain. ⟨10.1046/j.1472-765X⟩. ⟨hal-05269377⟩
Benjamin Soudais, Alexandre Gallais, Matthieu Schuers. Expérience et comportement des médecins généralistes dans la prise en charge des infections urinaires masculines : une étude qualitative. Congrès Médecine Générale France, Mar 2024, Paris, France. ⟨hal-05474393⟩
Nefert Candace Dossou, Estelle Leperchois, Bryce Leterrier, Astrid Vabret, Meriadeg M. Ar Gouilh. Unraveling the measles puzzle: genotypes shifting landscapes, selection and recombinants. EPIDEMICS, Nov 2023, Bologna (ITALY), Italy. ⟨hal-05604865⟩
Camille Villenave, Sandrine Dahyot, Marie Leoz, Camille Charbonnier, Martine Pestel-Caron. An optimized approach for processing urine samples for microbiome studies. International Conference on Clinical Metagenomics, Nov 2023, Geneve, Switzerland. ⟨hal-05046678⟩
Chloé Dubus, Fabienne De Oliveira, Jean-Christophe Plantier, Julia Dina, Alice Moisan. Séquençage de génomes complets du Virus Syncytial Respiratoire par séquençage haut débit. MICROBES, Oct 2023, Rennes, France. ⟨hal-05046492⟩
Anne-Sophie Delorme, Arnaud de la Blanchardière, Thibon Pascal, Lorant Guillaume, Isnard Christophe, et al.. Résistance aux céphalosporines de 3 ème génération des entérobactérales isolées d'hémocultures au CHU de Caen. JNRB, Jun 2023, Caen, France. ⟨hal-05528517⟩
Coraline Bernachot, François Gravey, Bénédicte Langlois, Salomé Lecoutour, Jc Giard, et al.. Etude de facteurs moléculaires associés aux Klebsiella pneumoniae multirésistantes épidémiques : une étude préliminaire phénotypique et génotypique sur 81 isolats de réanimation. JNRB, Jun 2023, Caen, France. ⟨hal-05528630⟩
Bénédicte Langlois, Christophe Isnard, Sébastien Galopin, Mamadou Godet, François Gravey, et al.. Acquisition d'Entérobactérales résistantes aux céphalosporines de troisième génération parmi les patients hospitalisés au long cours dans les services de réanimation. JNRB, Jun 2023, Caen, France. ⟨hal-05583260⟩
Manon Vautrin, Fabienne de Oliveira, Vinca Icard, Marie Leoz, Mary-Anne Trabaud, et al.. Mise en évidence de la transmission mère-enfant d'un VIH-1 recombinant intergroupes MO. JNRB, Jun 2023, Caen, France. ⟨hal-04185190⟩
Caroline Duval, Sandrine Dahyot, Jean-Christophe J.-C. Giard, Martine Pestel-Caron. Preliminary characterization of adaptation mechanisms of sequential urinary isolates of Pseudomonas aeruginosa. Journée normande de recherche biomédicale 2023, Jun 2023, CAEN, France. ⟨hal-04133141⟩
Camille Villenave, Sandrine Dahyot, Marie Leoz, Maxime Grand, Chervin Hassel, et al.. Etude préliminaire du microbiote urinaire bactérien de femmes non ménopausées. Journée Normande de Recherche Biomédicale 2023, Jun 2023, Caen, France. ⟨hal-04185198⟩
Alice Michel, Chervin Hassel, Hortense Petat, Marie Leoz, Meriadeg Le Gouil, et al.. Upper and lower respiratory tract microbiomes analysis in infants with severe asthma. Journée Normande de Recherche Biomédicale, Jun 2023, Caen, France. ⟨hal-04123344⟩
Nassim Boutouchent, Anaïs Lesourd, Soumaya Skalli, Xavier Odoux, Sophie Hüsler, et al.. Emergence de cas de diphtérie cutanée dans une population de migrants en région Normandie. 24èmes Journées Nationales d'Infectiologie, Jun 2023, Grenoble, France. ⟨hal-04185332⟩
Nassim Boutouchent, Isabelle Gueit, Julien Wils, Manuel Etienne, Sandrine Dahyot, et al.. Surdosage en ß lactamines au cours du traitement par amoxicilline ceftriaxone dans l'endocardite infectieuse à Enterococcus faecalis : épidémiologie et devenir des patients. 24èmes Journées Nationales d'Infectiologie, Jun 2023, Grenoble, France. ⟨hal-04185346⟩
C Jeanne-Leroyer, François Gravey, I Renouard, G Leduc, M Fèvre, et al.. Transmissions croisées des EBLSE en réanimation : résultats de 4 années de veille génomique et épidémiologique. Congrès National de la Société Française d'Hygiène Hospitalière, May 2023, Lille, France. ⟨hal-04185221⟩
Laurie Destruel, Marine Lecomte, Martine Pestel-Caron, Sandrine Dahyot. Sensibilité de Staphylococcus lugdunensis aux antiseptiques utilisés en milieu hospitalier. Congrès National de la Société Française d'Hygiène Hospitalière, May 2023, Lille, France. ⟨hal-04185210⟩
M Gonzalez, C Villenave, S Dahyot, M Pestel-Caron. Dynamique du microbiote urinaire chez la jeune femme en bonne santé. Rencontre Normande de Microbiologie, May 2023, Rouen, France. ⟨hal-05046632⟩
Elodie Alessandri-Gradt, Samuel Constant, Jean-Christophe Plantier, Georgios Stroulios, Salvatore Simmini, et al.. Génération d'organoïdes respiratoires à exposition extérieure apicale à partir de cellules de pools de donneurs. Journées francophones de virologie, Apr 2023, Paris, France. ⟨hal-04276932⟩
Marine Stoldick, Margot Vannier, Mikael Verdalles-Cazes, Manuel Etienne, Kévin Alexandre. Short-Course Versus Prolonged-Course Antimicrobial Therapy in Adults With Catheter-Related Septic Thrombosis: a Propensity-Weighted Retrospective Study. ECCMID, Apr 2023, Copenhagen, Denmark. ⟨hal-04184293⟩
Nassim Boutouchent, Fabien Lamoureux, Manuel Etienne, Julien Wils, Sandrine Dahyot, et al.. Therapeutic drug monitoring in patients with infective endocarditis treated with amoxicillin plus ceftriaxone. 33rd European Congress of Clinical Microbiology & Infectious Diseases (ECCMID), Apr 2023, Copenhagen, Denmark. 23, 2019. ⟨hal-04184240⟩
V Pargny, N Vautrin, O Minlong, D Ribet, M Pestel-Caron, et al.. In vitro activity of hydroxychloroquine in combination with antibiotics against uropathogenic Escherichia coli intracellular bacterial colonies. 33rd European Congress of Clinical Microbiology and Infectious Diseases (ECCMID 2023), Apr 2023, Copenhague, Denmark. ⟨hal-04184217⟩
Nicolas Vautrin, Sandrine Dahyot, Marie Leoz, François Caron, Maxime Grand, et al.. Recurrent cystitis episodes are caused by "ordinary" uropathogenic Escherichia coli strains. 33rd European congress of clinical microbiology and infectious diseases (ECCMID), Apr 2023, Copenhague, Denmark. ⟨hal-04184212⟩
Camille Villenave, Sandrine Dahyot, Marie Leoz, Maxime Grand, Chervin Hassel, et al.. Methods for studying the bacterial urinary microbiome of non menopausal women. ECCMID, Apr 2023, Copenhagen, Denmark. ⟨hal-04184256⟩
C. Marlat, Julien Grosjean, T. Pressat Laffouilhere, Manuel Etienne, Kévin Alexandre, et al.. Efficacy of antimicrobial-lock therapy in catheter-related bloodstream infection. 33rd European Congress of Clinical Microbiology & Infectious Diseases (ECCMID), Apr 2023, Copenhagen, Denmark. ⟨hal-04184248⟩
Caroline Duval. Survival mechanisms and adaptive evolution of Pseudomonas aeruginosa in the urinary tract. Journées de l'école doctorale n°497 nBISE 2023 (École doctorale Normande de biologie intégrative, santé, environnement), Apr 2023, ROUEN, France. ⟨hal-04133135⟩
Boris Kévin Tchounga, Mélanie Bertine, Florence Damond, Valentine Marie Ferré, A. Inwoley, et al.. DNA-confirmation of HIV-1&2 coinfections among dually-reactive Wast African patients. 30th Conference on Retroviruses and Opportunistic Infections (CROI), Feb 2023, Seattle, WA, United States. ⟨hal-05498149⟩
L Destruel, M Lecomte, M Grand, M Pestel-Caron, S Dahyot. Sensibilité de Staphylococcus lugdunensis aux antiseptiques utilisés en milieu hospitalier. RICAI 2022, Dec 2022, Paris, France. ⟨hal-04034467⟩
C Villenave, S Dahyot, M Leoz, M Grand, C Hassel, et al.. Mise en place des méthodes d’étude du microbiote urinaire bactérien de femmes non ménopausées. RICAI 2022, Dec 2022, Paris, France. ⟨hal-04034450⟩
M Siatkowski, S Dahyot, M Pestel-Caron, S Boyer. EVALUATION DES PERFORMANCES DE L'UF-4000 POUR LA DETECTION BACTERIENNE DANS LES LIQUIDES DE PONCTION. RICAI 2022, Dec 2022, Paris, France. ⟨hal-04034489⟩
V Pargny, N Vautrin, O Minlong, D Ribet, M Pestel-Caron, et al.. Activité d'associations Hydroxychloroquine-Antibiotique vis-à-vis de colonies bactériennes intracellulaires d'Escherichia coli. RICAI 2022, Dec 2022, Paris, France. ⟨hal-04034434⟩
A Michel, C Hassel, H Petat, M Leoz, Meriadeg Le Gouilh, et al.. Projet Microbiosthme : Dynamique des microbiomes respiratoires des voies supérieures et inférieures, associée à l'asthme sévère du nourrisson. Congrès de la FHU RESPIRE, Nov 2022, Forges-les-eaux, France. ⟨hal-04117856⟩
Asmae Bachr, Alizée Bardon, Sara Bencheikh, Fiona Bottin, Justine Flipo, et al.. GreenBIM : Environmental impact of Bioinformatics. JOBIM 2022, Jun 2022, Rennes (FR), France. ⟨10.14293/S2199-1006.1.SOR-.PPWHCXV.v1⟩. ⟨hal-05491617⟩
Alice Moisan, Brice Mastrovito, Fabienne de Oliveira, Mélanie Martel, Hugues Hedin, et al.. Transmission et circulation d'un recombinant SARS-CoV-2 Deltacron XD en Normandie. Journée Normande de Recherche Biomédicale (JNRB 2022), Jun 2022, Rouen, France. ⟨hal-03706243⟩
C Villenave, S Dahyot, M Leoz, M Grand, C Hassel, et al.. Etude du microbiote bactérien urinaire de femmes non ménopausées présentant une infection urinaire ou non. Journée Normande de Recherche Biomédicale (JNRB 2022), Jun 2022, Rouen, France. ⟨hal-03706231⟩
Nicolas Vautrin, Kévin Alexandre, David Ribet, Sandrine Dahyot, Marie Leoz, et al.. Place des rechutes et de l'invasion de la paroi vésicale dans la physiopathologie des cystites récidivantes à Escherichia coli. Journée Normande de Recherche Biomédicale (JNRB 2022), Jun 2022, Rouen, France. ⟨hal-03706255⟩
Matthieu Martineau, Sophie Castagnet, Eléna Kokabi, Agnès Tricot, Maryne Jay, et al.. Caractérisation des mycoplasmes respiratoires équins détectés en France en 2020 et 2021. Journée Normande de Recherche Biomédicale 2022, Jun 2022, Rouen, France. , 2022. ⟨hal-03811404⟩
H Petat, Matthieu Schuers, C Marguet, M Le Gouil, A Vabret. ECOVIR: mise en place d’une cohorte de recherche en virologie en soins primaires, un exemple de coopération pluri-professionnelle ville-hôpital. Journée Normande de Recherche Biomédicale 2022 (JNRB 2022), Jun 2022, Rouen, France. ⟨hal-03706299⟩
M Lecomte, M Grand, M Leoz, A Cottalorda, M Pestel-Caron, et al.. Adaptation phénotypique et génomique de P. aeruginosa au tractus urinaire. Journée Normande de Recherche Biomédicale (JNRB 2022), Jun 2022, Rouen, France. ⟨hal-03706266⟩
Romain Legros, Julie Gueudry, Céline Tyburn, Elodie Alessandri-Gradt. Fièvre de la vallée du Rift : diagnostic d'une arbovirose peu classique en France métropolitaine, à ne pas méconnaître !. Journée Normande de Recherche Biomédicale (JNRB 2022), Jun 2022, Rouen, France. ⟨hal-03706287⟩
L Destruel, M Lecomte, M Grand, M Pestel-Caron, S Dahyot. Étude de la sensibilité de Staphylococcus lugdunensis aux antiseptiques utilisés en milieu hospitalier. Journée Normande de Recherche Biomédicale 2022 (JNRB 2022), Jun 2022, Rouen, France. ⟨hal-03706279⟩
Alice Michel, Bénédicte Langlois, Simon Le Hello, François Gravey. Prévalence des mutations de l'opéron RamAR associées à un phénotype de résistance croisée aux antibiotiques chez les entérobactéries productrices de bêta-lactamases à spectre étendu, isolées au sein des services de réanimation du CHU de Caen. Journée Normande de Recherche Biomédicale (JNRB 2022), Jun 2022, Rouen, France. ⟨hal-04034388⟩
L Destruel, S Dahyot, X Argemi, M Grand, G Prevost, et al.. Biofilm formation of Staphylococcus lugdunensis strains is associated with clonal lineage and dependent on iron availability. 32nd European Congress of Clinical Microbiology & Infectious DiseasesECCMID, Apr 2022, Lisbonne, France. ⟨hal-03706333⟩
Alice MICHEL, Bénédicte Langlois, Simon Le Hello, François Gravey. Prevalence of mutations within RamAR operon associated with cross resistance phenotype among ESBL Enterobacteriaceae isolated in intensive care units. 32nd European Congress of Clinical Microbiology and Infectious Diseases, Apr 2022, Lisbon, Portugal. ⟨hal-04473237⟩
Nefert Candace Dossou, Isidore Gaubert, Edouard Cornet, Simon Le Hello, Damasie Malandain. Evaluation des performances du décompte des bactéries (BACT) dans les liquides biologiques sur SYSMEX UF 4000. RICAI, Dec 2021, Paris, France. ⟨hal-05604770⟩
Marine Pottier, F. Gravey, Sophie Castagnet, François Guérin, Antoine Géry, et al.. Étude de la production de biofilm, de la résistance aux antibiotiques et aux biocides chez des souches de Pseudomonas aeruginosa isolées chez l’Homme et l’animal. 3ème Journées Normandes de Recherche Biomédicales, Nov 2019, Caen, France. ⟨hal-04773009⟩
Benjamin Soudais, Virginie Lacroix-Hugues, François Meunier, David Darmon, André Gillibert, et al.. Description et prise en charge des infections urinaires masculines à partir d’une base de données de dossiers médicaux électroniques. Préconférence FAYR GP, Mar 2019, Paris, France. ⟨hal-05474414⟩
Marine Pottier, François Gravey, Sophie Castagnet, F. Guérin, A. Géry, et al.. Étude de la production de biofilm, de la résistance aux antibiotiques et aux biocides chez des souches de Pseudomonas aeruginosa isolées chez l’Homme et l’animal. 15ème Congrès national de la SFM « Microbes », 2019, Paris, France. ⟨hal-04782260⟩
Marine Pottier, François Gravey, Sophie Castagnet, F. Guérin, A. Gery, et al.. Étude de la production de biofilm, de la résistance aux antibiotiques et aux biocides chez des souches de Pseudomonas aeruginosa isolées chez l’Homme et l’animal. 4ème Journée Normande de Recherche biomédicale (JNRb 2019), 2019, Caen, France. ⟨hal-04782233⟩
Eliette Riboulet-Bisson, Maurizio Sanguinetti, Yanick Auffray, Axel Hartke, Jean-Christophe J.-C. Giard. Study of Ers, a new transcriptional regulator of Enterococcus faecalis. 14ème colloque du club des bactéries lactiques, May 2006, Paris, France. ⟨hal-05196173⟩

Chapitres d'ouvrage3 documents

Yves-Marie Vincent, Benjamin Soudais. Infections urinaires. Collège de Médecine Générale / R2C, Elsevier Masson, 2024, 9782294781834. ⟨hal-05474479⟩
Benjamin Soudais, Pierre-Alexandre Lambert, Léonardo Piloni. Bon usage des anti-infectieux. Collège de Médecine Générale R2C, Elsevier Masson, 2024, 9782294781834. ⟨hal-05474490⟩
Benjamin Soudais. Infections urinaires masculines. Thérapeutique en médecine générale - 5e édition, Global Média Santé, 2024, 9782919616442. ⟨hal-05474504⟩

Article de blog scientifique4 documents

François Gravey, Sylvain Brisse. Définition d’une souche épidémique et séquençage génomique : du seuil ‘magique’ aux seuils ‘ad hoc. 2025. ⟨hal-05222732⟩
François Gravey, Sylvain Brisse. Comparaison des séquences génomiques pour la surveillance épidémiologique et l’investigation d’épidémies : 3 approches complémentaires. 2023. ⟨hal-04034603⟩
Alice Moisan, Elodie Alessandri-Gradt, Fabienne de Oliveira, Jean-Christophe Plantier. Le séquençage des variants du Covid expliqué par ses spécialistes. 2022. ⟨hal-04039919⟩
Elodie Alessandri-Gradt, Anais Soares, Marie Gueudin. Une journée en immersion dans un laboratoire Covid-19. 2021. ⟨hal-04275563⟩

Pré-publications, Documents de travail3 documents

Nicolas de Prost, Pierre Bay, Marie Le Goff, Sébastien Préau, Aurélie Guigon, et al.. ICU patients with influenza during the 2025–26 season: a French prospective nationwide cohort study. 2026. ⟨hal-05655545⟩
Thien-Phong Vu Manh, Carla Gouin, Julien de Wolf, Luc Jouneau, Florentina Pascale, et al.. SARS-CoV2 infection in whole lung primarily targets macrophages that display subset-specific responses. 2025. ⟨hal-04612462⟩
Marine Wasniewski, Franck Boué, Céline Richomme, Etienne Simon-Lorière, Sylvie van der Werf, et al.. Investigations on SARS-CoV-2 and other coronaviruses in mink farms in France at the end of the first year of COVID-19 pandemic. 2023. ⟨pasteur-04073331⟩

Rapports1 document

Sophie Le Poder, Paul Alun Brown, Meriadeg M. Ar Gouilh, François Meurens, Gilles Meyer, et al.. Avis de l'Anses relatif au rôle épidémiologique éventuel de certaines espèces animales dans le maintien et la propagation du virus SARS-CoV-2. Autosaisine n°2020-SA-0059, Anses. 2020, 30 p. ⟨anses-04304225⟩

Thèses14 documents

Romain Delattre. Caractérisation phénοtypique et génomique de souches de Crοnοbacter spp. issues d'ateliers de fabrication de produits laitiers pulvérulents. Ecologie, Environnement. Normandie Université, 2025. Français. ⟨NNT : 2025NORMC430⟩. ⟨tel-05449827⟩
Caroline Duval Martin. Mécanismes de survie et d'évolution adaptative de Pseudomonas aeruginοsa dans l'arbre urinaire. Médecine humaine et pathologie. Normandie Université, 2025. Français. ⟨NNT : 2025NORMR089⟩. ⟨tel-05500505⟩
Bénédicte Langlois. Dynamique évolutive des populations de Κlebsiella pneumοniae chez les patients de réanimatiοns par explorations génοmiques et phénοtypiques. Bactériologie. Normandie Université, 2025. Français. ⟨NNT : 2025NORMC421⟩. ⟨tel-05410848⟩
Youssef Gouait. Caractérisation de l’évolution génomique des coronavirus OC43 entre 2011 et 2018 au CHU de Caen. Virologie. Université de Caen Normandie, 2025. Français. ⟨NNT : ⟩. ⟨tel-05605691⟩
Emmanuel Piednoir. Indicateurs de prescription antibiotique en sοin primaire : la triangulation prescripteur-usager-organisation du système de santé pοur définir des priorités d'implémentation sur le terrain. Maladies infectieuses. Normandie Université, 2024. Français. ⟨NNT : 2024NORMC425⟩. ⟨tel-04932043⟩
Isidore Gaubert. Développement et évaluation d'un système de détection moléculaire du SARS-CoV-2 en LAMP PCR. Virologie. Université de Caen Normandie, 2023. Français. ⟨NNT : ⟩. ⟨tel-05604888⟩
Matthieu Martineau. Prévalence, identification et caractérisation des bactéries du genre Mycoplasma détectées dans les affections respiratoires équines. Médecine humaine et pathologie. Normandie Université, 2023. Français. ⟨NNT : 2023NORMC432⟩. ⟨tel-04483951⟩
Manon Vautrin. Recombinaison inter-groupes M et O du VIH-1 : Capacité réplicative, impact du profil de recombinaison et transmission mère-enfant.. Médecine humaine et pathologie. Normandie Université, 2023. Français. ⟨NNT : 2023NORMR069⟩. ⟨tel-04438100⟩
Laurie Destruel. Caractérisation phénotypique et moléculaire de différents complexes clonaux de Staphylococcus lugdunensis. Médecine humaine et pathologie. Normandie Université, 2023. Français. ⟨NNT : 2023NORMR061⟩. ⟨tel-04703460⟩
Hortense Petat. Etude des codétections virales dans les prélèvements respiratoires : apport de la quantification virale normalisée pour la compréhension des infections respiratoires virales multiples.. Biologie moléculaire. Normandie Université, 2023. Français. ⟨NNT : 2023NORMR023⟩. ⟨tel-04190569⟩
Marine Pottier. Implication de Pseudomonas aeruginosa en santé humaine et animale en Normandie : résistances, facteurs d’adaptation et biofilm. Médecine vétérinaire et santé animale. Normandie Université, Université Caen Normandie, 2023. Français. ⟨NNT : 2023NORMC403⟩. ⟨tel-04961323⟩
François Gravey. Génomique des bactéries multirésistantes aux antibiotiques en Normandie : investigations épidémiques, études populationnelles, mécanismes de résistance aux antibiotiques. Médecine humaine et pathologie. Normandie Université, 2022. Français. ⟨NNT : 2022NORMC428⟩. ⟨tel-04128969⟩
Nicolas Vautrin. Cystites récidivantes à Escherichia coli : facteurs microbiens de la persistance. Médecine humaine et pathologie. Normandie Université, 2022. Français. ⟨NNT : 2022NORMR087⟩. ⟨tel-04033771⟩
Nefert Candace Dossou. Suivi de la réplication du Torque teno virus dans le cadre de la prévention des complications infectieuses chez les patients greffés rénaux au CHU de Caen. Virologie. Université de Caen Normandie, 2020. Français. ⟨NNT : ⟩. ⟨tel-05604810⟩

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Elodie Alessandri-Gradt, Flora Archambault. Mais KES-C-K'C un organoïde ?. 2024. ⟨hal-04725625⟩

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Publications scientifiques

Contact

Disciplines

Mots-clefs

Auteurs

Revues

Année de production

Institutions

Laboratoires

Départements

Équipes de recherche

Articles dans une revue196 documents

Communications dans un congrès85 documents

Poster de conférence95 documents

Chapitres d'ouvrage3 documents

Article de blog scientifique4 documents

Pré-publications, Documents de travail3 documents

Rapports1 document

Thèses14 documents

Vidéos1 document